LOC_Os02g15230

Expression Profile

RGAP LOCUS ID LOC_Os02g15230
RAP-DB ID Os02g0250400
Function GDSL-like lipase/acylhydrolase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 11

2) CELLO Prediction
localization Chloroplast
score 1.07

3) NUCPRED Prediction
localization Non Nuclear
score 0.04

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.37
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) BS1
Function assigned as per literature BS1 plays an important role in the maintenance of proper acetylation level on the xylan backbone, which is crucial for secondary wall formation and patterning
Subcellular localization as per literature Golgi appartus
Cells used for localization experiment Rice protoplasts cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 28260782
Reference of localization https://www.nature.com/articles/nplants201717
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.084
NLS score -0.47
Protein Sequence >LOC_Os02g15230.1 protein
MGAVRGILVVAVVLAVAAILAGAAEGKVNGKAKGKYRALFNFGDSLADAGNLLANGVDFRLATAQLPYGQTFPGHPTGRCSDGRLVVDHLADEFGLPLLP
PSKLKNSSFAHGANFAITGATALDTPYFEAKGLGAVVWNSGALLTQIQWFRDLKPFFCNSTKVECDEFYANSLFVVGEFGGNDYNAPLFAGKGLEEAYKF
MPDVIQAISDGIEQLIAEGARELIVPGVMPTGCFPVYLNMLDEPADGYGPQSGCVRRYNTFSWVHNAHLKRMLEKLRPKHPNVRIIYGDYYTPVIQFMLQ
PEKFGFYKQLPRACCGAPGSVAKAAYNFNVTAKCGEAGATACDDPSTHWSWDGIHLTEAAYGHIARGWVYGPFADQPIFQSS

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Molecular Function
GO Term hydrolase activity
4
GO Category Biological Process
GO Term lipid metabolic process
Presence of Splice variants YES