LOC_Os02g13870

Expression Profile

RGAP LOCUS ID LOC_Os02g13870
RAP-DB ID Os02g0232900
Function aquaporin protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cysk
score 10

2) CELLO Prediction
localization PlasmaMembrane
score 4.393

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Cytoplasm
score 76
confidence value 0.71
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNIP1;1
Function assigned as per literature OsNIP1;1 has role in restricting arsenite loading into the xylem
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment rice protoplasts and in tobacco (Nicotiana benthamiana Domin) leaf epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 29749629
Reference of localization https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.15190
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.067
NLS score -0.47
Protein Sequence >LOC_Os02g13870.1 protein
MAGGDNNSQTTNGGSGHEQRAMEEGRKQEEFAADGQGCGLAFSVPFIQKIIAEIFGTYFLIFAGCGAVTINQSKNGQITFPGVAIVWGLAVMVMVYAVGH
ISGAHFNPAVTLAFATCRRFPWRQVPAYAAAQMLGATLAAGTLRLMFGGRHEHFPGTLPAGSDVQSLVLEFIITFYLMFVISGVATDNRAIGELAGLAVG
ATILLNVLIAGPISGASMNPARSLGPAMIGGEYRSIWVYIVGPVAGAVAGAWAYNIIRFTNKPLREITKSGSFLKSMNRMNSST

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Molecular Function
GO Term transporter activity
3
GO Category Cellular comBiological Processonent
GO Term membrane
4
GO Category Biological Process
GO Term cellular process
5
GO Category Biological Process
GO Term biological_process
6
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No