LOC_Os02g12290

Expression Profile

RGAP LOCUS ID LOC_Os02g12290
RAP-DB ID Os02g0214300
Function nuclear ribonuclease Z, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization pero
score 5

2) CELLO Prediction
localization Cytoplasmic
score 1.944

3) NUCPRED Prediction
localization Non Nuclear
score 0.08

4) Y-Loc Prediction
localization Chloroplast
score 4
confidence value 0.1
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) TMS5
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.106
NLS score -0.47
Protein Sequence >LOC_Os02g12290.1 protein
MANSGKSSPAATSTTAPPPGRPKAKAPPLTVEGYPVEGISIGGQETCVIFPTLSAAFDIGRCPQRAVSQEFLFISHAHLDHIGGLPMYVATRGLYRQRPP
TIFIPACLRDPVERLFELHRSMDQSELSHNLVPLEIGQEHELRRDLKVKAFKTYHAIPSQGYVIYTVKQKLKPEYLGLPGSEIKQLKLSGVEITNTLTVP
EIAFTGDTMADFILDPDNADVLKAKILVVESTFVDDSVTIEHAREYGHTHLFEILNQCDKLENKAILLIHFSARYTAEEIDIAINKLPPSFRSRVHALKE
GF

GO Analysis
1
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
2
GO Category Cellular comBiological Processonent
GO Term nucleus
3
GO Category Molecular Function
GO Term nuclease activity
Presence of Splice variants No