LOC_Os02g10920
| RGAP LOCUS ID | LOC_Os02g10920 | ||||
| RAP-DB ID | Os02g0203700 | ||||
| Function | zinc finger family protein, putative, expressed | ||||
Sub-cellular Localization Predictions |
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1) WoLF-PSORT Prediction |
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| localization | Nuclear | ||||
| score | 9 | ||||
2) CELLO Prediction |
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| localization | Nuclear | ||||
| score | 1.716 | ||||
3) NUCPRED Prediction |
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| localization | Non Nuclear | ||||
| score | 0.25 | ||||
4) Y-Loc Prediction |
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| localization | Nuclear | ||||
| score | 87.4 | ||||
| confidence value | 0.3 | ||||
| Number Of Software Predicting Nucleus | 3 | ||||
| Seed Specific | No | ||||
| Transcription factor category | |||||
Experimental evidence for subcellular localization |
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| Published gene name (updated 1 January 2020) | SRZ1 | ||||
| Function assigned as per literature | SRZ1 may play negative roles in abiotic stress signaling | ||||
| Subcellular localization as per literature | Cytoplasm | ||||
| Cells used for localization experiment | Stable transgenic tobacco leaves and root cells | ||||
| NUCLEAR or Not Nuclear | NOT NUCLEAR | ||||
| PMID | not available | ||||
| Reference of localization | https://www.sciencedirect.com/science/article/pii/S016894520700310X | ||||
| Is Subcellular localization evidence by author available ? | No | ||||
Sequence Analysis |
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| Number of PAT4 | 0 | ||||
| Number of PAT7 | 0 | ||||
| Number of Bipartite | 0 | ||||
| Basic residues % | 0.127 | ||||
| NLS score | -0.47 | ||||
| Protein Sequence | >LOC_Os02g10920.1 protein MNRKPGDWDCRACQHLNFSRRDLCQRCGEPRGAADRGSGGGGDYANFGGRGGSSFGGGFGTGSDVRPGDWYCNCGAHNFASRSSCFKCAAFKDDAAVNSG GAGAFDGGDMSRSRGYGFGSGAVRASRPGWKSGDWICTRSGCNEHNFASRMECFRCNAPRDSGSAMTYENYLH |
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GO Analysis |
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| 1 |
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| 2 |
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| Presence of Splice variants | YES | ||||