LOC_Os02g10900

Expression Profile

RGAP LOCUS ID LOC_Os02g10900
RAP-DB ID Os02g0203500
Function NB-ARC domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization PlasmaMembrane
score 1.395

3) NUCPRED Prediction
localization Non Nuclear
score 0.33

4) Y-Loc Prediction
localization Cytoplasm
score 50
confidence value 0.09
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) RLS1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.112
NLS score -0.16
Protein Sequence >LOC_Os02g10900.1 protein
MDAVNVLASATQLVSAMLTAVGALEQAAADFAEAPRRLQVLEDFVSDLGLLMQQSKQKHAHKMHAPQLERQLQSLGKLMDQLHANITKARRVLKKGKGKK
GLARVVWSSVTGDPLMKYVQLIRDDLNWWLELQKLTESVGNVIASTAKSTPSLVRVKSEHGYPVSKKCSYVRELLINDGSHRVVLIVGLSGIGKSCLARQ
IASDPPGNFVDGAIELSFGRWCSRAACNGNRDEYHKRLVRKICKFLVQIGSMTVNEDVGKDLEDVCYLLQTALVGRSMLILLDDVWEQDIVDRFTNLYDN
DCRYLVTTRDEAIYEIAEAEKVEISKDDIKEIGKDILLYHSLLTVEELPPVAYDLLDRCGHHPLTVAVMGKALRKETRVEKWDRAISNLSTYATCAPGPV
SYVNEKEVETTLTIFGSFEFSLEAMPENSRRFFMVLAAISWDEPVPEACLESMWSALMQDTLFPLVVSKLVEGSLIIKLEDQSMYHMHDMVSLYLESKTD
NAVHTLLFGSFPEYAALVSPWLFIFGKESAKERAEQKIRSLFSLLEFMEIEILLGSTTQALMECKSISEFEASRLHFSKILSPRIAELISVGSTSLIVTV
TKSITVIFFQGDYAKLAQSLETAGSVDKLIHVLRGCEDSSTLANVSTVLAKISEHVDATTADEILATIPMDQIAKLLSPENEEWHEIVFTTLASLIKVGK
LRAVETMIESGIDKKLLVLLGSGSEISQHHAIIMLKTFCELGAPLQGCMGPGALTHLPWHARLSLERFVLFDQNVTPSPKPQQSFELILHKILHRDNKDN
IEAIQGLLPLAERANDSRVQDLLLGSNMSNGLALLLQRRDIESNQVRSHTAFLVMKLACTGGEPYVHRFLEANIVHELIDMMQCNINDLQDSAYYALHQI
IFAKGGSLVLQRFLQAGTIEKLVNLLDRKSSKTKELTMQLLVDIAVVGTKPCIERMLSSQIIEKFVALEKAGGSFSGAVSRYVQGLNMCKNVQSAERSVM
KQQILRKVRSEIRGHDLEASLVASVEACISEKGASSRRKK

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Molecular Function
GO Term nucleotide binding
3
GO Category Biological Process
GO Term response to stress
Presence of Splice variants No