LOC_Os02g10780

Expression Profile

RGAP LOCUS ID LOC_Os02g10780
RAP-DB ID Os02g0202200
Function SPX domain containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 6

2) CELLO Prediction
localization Nuclear
score 1.905

3) NUCPRED Prediction
localization Non Nuclear
score 0.53

4) Y-Loc Prediction
localization Nuclear
score 95.15
confidence value 0.82
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSPX2
Function assigned as per literature SPX2 is involved in Phosphate-sensing mechanism in plants
Subcellular localization as per literature Nucleus
Cells used for localization experiment Rice protoplasts.
NUCLEAR or Not Nuclear NUCLEAR
PMID 25271318
Reference of localization http://www.pnas.org/content/111/41/14953.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.143
NLS score -0.16
Protein Sequence >LOC_Os02g10780.1 protein
MKFGKSLSSQIVEMQPEWRDNFLSYKDLKKRLNLISGGAAGERASKRRRVGGATAVTVTAAAAGGMTLEQAGFVGLLDAELDKFNFFFLEKEEEYVIKQK
ELRERKMASAEEVMRVRKEIVDLHGEMVLLENYSALNYTGLVKILKKYDKRTGSMIRLPFVQKVLQQPFFTTDLLYKLVKECEEMLDQLMPTNEHSVASE
DGKDDSEGEEKGSKPSSSSSANGGAVPGEAEAEDERSTDMKSTVTAALRALREIRSGSSTVSVFSLPPLHGSNGQDEPGR

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Biological Process
GO Term response to extracellular stimulus
3
GO Category Biological Process
GO Term cell communication
4
GO Category Biological Process
GO Term response to stress
5
GO Category Cellular comBiological Processonent
GO Term nucleus
Presence of Splice variants No