LOC_Os02g09060

Expression Profile

RGAP LOCUS ID LOC_Os02g09060
RAP-DB ID Os02g0182900
Function BRCA1-associated protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 12

2) CELLO Prediction
localization Nuclear
score 2.712

3) NUCPRED Prediction
localization Non Nuclear
score 0.17

4) Y-Loc Prediction
localization Cytoplasm
score 98
confidence value 0.46
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) APIP10
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.095
NLS score 0.04
Protein Sequence >LOC_Os02g09060.1 protein
MATSGGEDPSGSASSSASALDSLPFSSGNPRIEETRGVVLLHPEPPAASSSSLLPVGRKPRVCVPGVPNHLTYADFGRFCASWASHILETRIIRIDGVED
QYGVLIKFDTQSFTDSFYMSFNGNRFSSLEGNVCRVRFVEDVHYTQLIEHAHSSVTSSAEQPTCPVCLERLDQDPGGILTTICNHSFHYSCMSKWADSSC
PVCRYCQQEPEKSSCSVCGTSENLWICVICGHVGCGRYKGGHAIEHWKETQHCYSLELETQKVWDYAGDNYVHRLIQSKTDGNLVEYNFYGDHSVDGMCS
TCNGDAGISEALLDSKMEAIVEEYNDLVTSQLEKQRNYYESLLLEVKEDNEKEIAAATEKAVGIKVQKLQAKLDKCMEETGFLNDIHENLVKNMEMWRER
IQKVKEREQAAIRLKDEKIEKLEEELRDLIAHFERQNTVAEASESMSSDINGSTILSVPSESSASSNSSIRN

GO Analysis
1
GO Category Molecular Function
GO Term protein binding
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Cellular comBiological Processonent
GO Term intracellular
4
GO Category Biological Process
GO Term protein modification process
5
GO Category Molecular Function
GO Term catalytic activity
6
GO Category Biological Process
GO Term post-embryonic development
Presence of Splice variants YES