LOC_Os02g06360

Expression Profile

RGAP LOCUS ID LOC_Os02g06360
RAP-DB ID Os02g0158300
Function uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 11

2) CELLO Prediction
localization PlasmaMembrane
score 1.322

3) NUCPRED Prediction
localization Non Nuclear
score 0.08

4) Y-Loc Prediction
localization Nuclear
score 45.86
confidence value 0.05
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCBSSIS1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.084
NLS score -0.47
Protein Sequence >LOC_Os02g06360.1 protein
MGSLPVSSPECAPGRRVTVAASDLAPLFGAQRRHLDHFFDRLDLSQAAAFAQALVDAPGAVFFTGVGKSGIVARKLAQTLASLGFTRAGFLSPVDALHGD
IGSVFPGDLLVLLSKSGASDELLALAPCARAKGAHLISLTSAASGADCPLAAVCDLNVHLPLQAEVCPFGLAPVTSTAIQMVFGDTVVAAIMEARRLSRD
QYASNHPAGKIGKSLIFKVKDVMKKQNELPLCKEGDMIMDQLTELTSKGCGCLLVVDDEYHLIGTFTDGDLRRTLKASGQAIFNLTVGEMCNRHPRTITA
DAMAVQAMEKMESPPSPVQFLPVVDSNNVVCGIITLHGLVSAGL

GO Analysis
1
GO Category Molecular Function
GO Term carbohydrate binding
2
GO Category Molecular Function
GO Term catalytic activity
3
GO Category Biological Process
GO Term carbohydrate metabolic process
Presence of Splice variants No