LOC_Os02g05980

Expression Profile

RGAP LOCUS ID LOC_Os02g05980
RAP-DB ID Os02g0154200
Function phytosulfokine receptor precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 11

2) CELLO Prediction
localization Nuclear
score 1.196

3) NUCPRED Prediction
localization Non Nuclear
score 0.45

4) Y-Loc Prediction
localization Chloroplast
score 8
confidence value 0.34
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) LRK1
Function assigned as per literature LRK1 regulates rice branch number by enhancing cellular proliferation
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 19619185
Reference of localization https://onlinelibrary.wiley.com/doi/epdf/10.1111/j.1467-7652.2009.00428.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.079
NLS score -0.04
Protein Sequence >LOC_Os02g05980.1 protein
MQPPHFSYKTQSNRLPIPVLSLALVLLLNFTSPTSSCTEQEKNSLLNFLTGLSKDGGLSMSWKDGVDCCEWEGITCRTDRTVTDVSLPSRSLEGYISPSL
GNLTGLLRLNLSYNLLSSVLPQELLSSSKLIVIDISFNRLNGGLDKLPSSTPARPLQVLNISSNLLAGQFPSSTWVVMTNLAALNVSNNSFTGKIPTNFC
TNSPSLAVLELSYNQFSGSIPPELGSCSRLRVLKAGHNNLSGTLPDEIFNATSLECLSFPNNNLQGTLEGANVVKLGKLATLDLGENNFSGNIPESIGQL
NRLEELHLNNNKMFGSIPSTLSNCTSLKTIDLNSNNFSGELMNVNFSNLPSLQTLDLRQNIFSGKIPETIYSCSNLTALRLSLNKFQGQLSKGLGNLKSL
SFLSLGYNNLTNITNALQILRSSSKLTTLLISNNFMNESIPDDDRIDGFENLQVLDLSGCSFSGKIPQWLSKLSRLEMLVLDNNQLTGPIPDWISSLNFL
FYLDVSNNNLTGEIPMALLQMPMLRSDRAAAQLDTRAFELPVYIDATLLQYRKASAFPKVLNLGNNEFTGLIPQEIGQLKALLLLNLSFNKLYGDIPQSI
CNLRDLLMLDLSSNNLTGTIPAALNNLTFLIEFSVSYNDLEGPIPTGGQFSTFTNSSFYGNPKLCGPMLTHHCSSFDRHLVSKKQQNKKVILVIVFCVLF
GAIVILLLLGYLLLSIRGMSFTTKSRCNNDYIEALSPNTNSDHLLVMLQQGKEAENKLTFTGIVEATNNFNQEHIIGCGGYGLVYKAQLPDGSMIAIKKL
NGEMCLMEREFSAEVETLSMARHDNLVPLWGYCIQGNSRLLIYSYMENGSLDDWLHNKDDDTSTILDWPRRLKIAKGASHGLSYIHNICKPRIVHRDIKS
SNILLDKEFKAYIADFGLSRLILPNKTHVTTELVGTLGYIPPEYAQAWVATLKGDVYSFGVVLLELLTGRRPVPILSTSKELVPWVQEMVSNGKQIEVLD
LTFQGTGCEEQMLKVLEIACKCVKGDPLRRPTMIEVVASLHSIDPDGLT

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term signal transduction
4
GO Category Molecular Function
GO Term nucleotide binding
5
GO Category Biological Process
GO Term protein modification process
6
GO Category Molecular Function
GO Term kinase activity
7
GO Category Molecular Function
GO Term receptor activity
8
GO Category Molecular Function
GO Term signal transducer activity
9
GO Category Molecular Function
GO Term binding
Presence of Splice variants No