LOC_Os02g04130

Expression Profile

RGAP LOCUS ID LOC_Os02g04130
RAP-DB ID Os02g0134200
Function DUF1645 domain containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Nuclear
score 3.324

3) NUCPRED Prediction
localization Non Nuclear
score 0.38

4) Y-Loc Prediction
localization Nuclear
score 81.44
confidence value 0.25
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSGL
Function assigned as per literature OsSGL is a pleiotropic stress-related gene enhances grain length and yield in rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 27917884
Reference of localization https://www.nature.com/articles/srep38157#s1
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.118
NLS score -0.47
Protein Sequence >LOC_Os02g04130.1 protein
MPPSAAAAAAMAQSPRSLHTLISFGRGADGVDDDEATPASVDVGDAEGAGLDLDFAFAPPVSAAELAPADDIFAHGRIVPAYPVFDRSLLDLSPGDASTA
APSADTYCAWTPRSAPGSPGRDRFPKSASTGGESSSSSRRWRLRDLVGAGGRSRSDGKDKFAFLHHHAAAPPSSKLKTPPPPQQPQQKKQSAVKTKPAAK
KGVVTEMDMATAHRLFYSKASAGGDRRPQQASYLTYRPAFSGLFALGRSQHHTAY

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Biological Process
GO Term response to abiotic stimulus
Presence of Splice variants No