LOC_Os02g03410

Expression Profile

RGAP LOCUS ID LOC_Os02g03410
RAP-DB ID Os02g0126400
Function CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 5

2) CELLO Prediction
localization Cytoplasmic
score 3.539

3) NUCPRED Prediction
localization Non Nuclear
score 0.32

4) Y-Loc Prediction
localization Cytoplasm
score 98
confidence value 0.68
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCPK4
Function assigned as per literature OsCPK4 functions as a positive regulator of the salt and drought stress responses
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 24784760
Reference of localization http://www.plantphysiol.org/content/165/2/688.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.157
NLS score 0.38
Protein Sequence >LOC_Os02g03410.1 protein
MGACFSSHTATAAADGGSGKRQQRKGDHKGKLPDGGGGEKEKEAARVEFGYERDFEGRYQVGRLLGHGQFGYTFAATDRASGDRVAVKRIDKAKMVRPVA
VEDVKREVKILKELKGHENIVHFYNAFEDDSYVYIVMELCEGGELLDRILAKKNSRYSEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKEDS
PLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGRRPFWNKTEDGIFREVLRNKPDFRKKPWPGISSGAKDFVKKLL
VKNPRARLTAAQALSHPWVREGGEASEIPVDISVLSNMRQFVKYSRFKQFALRALASTLKEEELADLKDQFDAIDVDKSGSISIEEMRHALAKDLPWRLK
GPRVLEIIQAIDSNTDGLVDFEEFVAATLHIHQMAELDSERWGLRCQAAFSKFDLDGDGYITPDELRMVQHTGLKGSIEPLLEEADIDKDGRISLSEFRK
LLRTASMSNLPSPRGPPNPQPL

GO Analysis
1
GO Category Molecular Function
GO Term kinase activity
2
GO Category Molecular Function
GO Term nucleotide binding
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term protein modification process
5
GO Category Molecular Function
GO Term binding
Presence of Splice variants YES