LOC_Os02g02890

Expression Profile

RGAP LOCUS ID LOC_Os02g02890
RAP-DB ID Os02g0121300
Function peptidyl-prolyl cis-trans isomerase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 14

2) CELLO Prediction
localization Cytoplasmic
score 3.773

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.25
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCYP2|OsCyp2-P|LRT2
Function assigned as per literature LRT2/ OsCYP2 has role in auxin signaling
Subcellular localization as per literature cytosol and nucleus
Cells used for localization experiment Tobacco leaves
NUCLEAR or Not Nuclear NUCLEAR
PMID 23501875
Reference of localization https://www.cell.com/molecular-plant/pdf/S1674-2052(14)60241-0.pdf
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.116
NLS score -0.47
Protein Sequence >LOC_Os02g02890.1 protein
MSNTRVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHD
SPGILSMANAGPNTNGSQFFICTVPCSWLDGKHVVFGRVVEGMDVVKAIEKVGSRGGSTAKPVVIADCGQLS

GO Analysis
1
GO Category Biological Process
GO Term protein metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term catalytic activity
4
GO Category Cellular comBiological Processonent
GO Term cytosol
5
GO Category Biological Process
GO Term protein modification process
6
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No