LOC_Os02g02860

Expression Profile

RGAP LOCUS ID LOC_Os02g02860
RAP-DB ID Os02g0121000
Function glutamyl-tRNA synthetase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 13

2) CELLO Prediction
localization Cytoplasmic
score 1.444

3) NUCPRED Prediction
localization Non Nuclear
score 0.21

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.2
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGluRS|Cde1(t)
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.12
NLS score -0.47
Protein Sequence >LOC_Os02g02860.1 protein
MMAAAMGSPWLRIRLLPEVPPRLLRPHLRRTLSVRASASASASPDGAGGPVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKK
SEEAVLSDLAWLGLDWDEGPDVGGEFGPYRQSERNSMYKQYAEKLMESGAVYQCFCSSEELEQMKETAKQMQLPPVYMGKWGTASDAEIQQELEKGTPYT
YRFRVPKEGSLKINDLIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMRISHVIRAEEHLPNTLRQALIYKALGFPMPSFAHVSLILAPDRSKLS
KRHGATSVGQYKEMGYLPQAMVNYLALLGWGDGTENEFFTIDDLVEKFTINRVNKSGAVFDAVKLKWMNGQHLRSFPPDVLIKSFEDRWKDTGILQESES
GFAKEAAELLKDGIDLITDADAALSNLLSYPLHATLSSDEAKSVVQDKLSEVASGLISAYDSGELCQALAEGRDGWQKWVKIFGKSLKRKGKSLFMPLRV
LLTGKLHGPDMGGTVVLIHKAGTCGAVTQQSGFVNLDERFRILKEVEWESLVQEQESPAETAVPASR

GO Analysis
1
GO Category Biological Process
GO Term cellular component organization
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term catalytic activity
4
GO Category Biological Process
GO Term flower development
5
GO Category Molecular Function
GO Term protein binding
6
GO Category Biological Process
GO Term translation
7
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
8
GO Category Cellular comBiological Processonent
GO Term mitochondrion
9
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No