LOC_Os02g02840

Expression Profile

RGAP LOCUS ID LOC_Os02g02840
RAP-DB ID Os02g0120800
Function ras-related protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Chloroplast
score 1.248

3) NUCPRED Prediction
localization Non Nuclear
score 0.18

4) Y-Loc Prediction
localization Cytoplasm
score 96
confidence value 0.61
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsRacB
Function assigned as per literature
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Onion epidermal cells and transgenic Arabidopsis protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 16531052
Reference of localization https://www.sciencedirect.com/science/article/pii/S0981942806000076
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.127
NLS score 0.93
Protein Sequence >LOC_Os02g02840.1 protein
MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKW
IPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFDAAIKVVLQPPKAKKKKKAQRGACSIL

GO Analysis
1
GO Category Biological Process
GO Term cellular component organization
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term pollination
4
GO Category Biological Process
GO Term anatomical structure morphogenesis
5
GO Category Biological Process
GO Term cell differentiation
6
GO Category Biological Process
GO Term cell growth
7
GO Category Biological Process
GO Term multicellular organismal development
8
GO Category Cellular comBiological Processonent
GO Term cytoplasm
9
GO Category Biological Process
GO Term transport
10
GO Category Cellular comBiological Processonent
GO Term nucleolus
11
GO Category Molecular Function
GO Term protein binding
12
GO Category Cellular comBiological Processonent
GO Term cytoskeleton
13
GO Category Cellular comBiological Processonent
GO Term plasma membrane
14
GO Category Cellular comBiological Processonent
GO Term nucleus
15
GO Category Biological Process
GO Term catabolic process
16
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
17
GO Category Molecular Function
GO Term hydrolase activity
18
GO Category Molecular Function
GO Term nucleotide binding
19
GO Category Cellular comBiological Processonent
GO Term cell
Presence of Splice variants No