LOC_Os02g02540

Expression Profile

RGAP LOCUS ID LOC_Os02g02540
RAP-DB ID Os02g0117500
Function glutamate receptor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 13

2) CELLO Prediction
localization PlasmaMembrane
score 4.732

3) NUCPRED Prediction
localization Non Nuclear
score 0.42

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.22
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGLR3.2
Function assigned as per literature OsGLR3.2 might be involved in mediating ion uptake
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Tobacco leaf epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 26956369
Reference of localization https://thericejournal.springeropen.com/articles/10.1186/s12284-016-0081-x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.09
NLS score 0.95
Protein Sequence >LOC_Os02g02540.1 protein
MKIGLLMLLVLFLVMSPDGIRRSLAARPSIVNIGAILRFNSTIGGVSMIAIQAALEDINSDSTILNGTTLKVDMRDTNCDDGFLGMVEALQFMETDVIAI
IGPQCSTIAHIVSYVANELRVPLMSFASDATLSSIQFPFFVRTAPSDLYQMDAVAAIVDYYRWKIVTAIYIDDDYGRNGIATLDDALTQRRCKISYKIAF
PANARKSDLINLLVSVSYMESRVIILHTGAGPGLKIFSLANQLSMMGNGYVWIATDWLSAYLDANSSVPDETMYGMQGVLTLRPHIPESKMKSNLISKWS
RLSKKYSYSYLRTSSYAFYVYDSVWAVARALDAFFDDGGKISFSNDSRLRDETGGTLHLEAMSIFDMGNNLLEKIRKANFTGVSGQVQFDATGDLIHPAY
DVINIIGNGMRTVGYWSNYSSLLSTVLPEVLYSEPPNNSLANQHLYDVIWPGQTAQTPRGWVFPSNAKELKIGVPNRFSFREFVTKDNVTGSMKGYCIDV
FTQALALLPYPVTYKFIPFGGGNENPHYDKLVQMVEDNEFDAAIGDIAITMSRTVTTDFTQPFIESGLVILAPVKKHIVNSWAFLQPFTLQMWCVTGLFF
LVVGAVVWVLEHRINDEFRGSPREQIITIFWFSFSTLFFAHRENTMSTLGRGVLIIWLFVVLIIQSSYTASLTSILTVQQLDTSIRGIDDLKNSDGPIGF
QVGSFAEEYMVRELNISRSRLRALGSPEEYAEALKHGPKRGGVMAIVDERPYVELFLSTYCKIAVAGSDFTSRGWGFAFPRDSPLQIDLSTAILSLSENG
ELQRIHDKWLKTSECSADNTEFVDSDQLRLESFWGLFLICGIACVIALLIYFFTTVRKFLRHEPPEDPTPRPGGSTTLPDERTPPKNGQEKCNCRNFISF
LDHKEPPKKKRSLSLTPTTPLSNFTALEIEGPVRTVRNGSVVDI

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Biological Process
GO Term cellular process
3
GO Category Cellular comBiological Processonent
GO Term membrane
4
GO Category Biological Process
GO Term signal transduction
5
GO Category Biological Process
GO Term response to abiotic stimulus
6
GO Category Biological Process
GO Term response to endogenous stimulus
7
GO Category Molecular Function
GO Term receptor activity
8
GO Category Molecular Function
GO Term signal transducer activity
9
GO Category Biological Process
GO Term tropism
10
GO Category Molecular Function
GO Term transporter activity
11
GO Category Biological Process
GO Term cellular homeostasis
Presence of Splice variants No