LOC_Os02g02400

Expression Profile

RGAP LOCUS ID LOC_Os02g02400
RAP-DB ID Os02g0115700
Function catalase isozyme A, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 8

2) CELLO Prediction
localization Peroxisomal
score 3.409

3) NUCPRED Prediction
localization Non Nuclear
score 0.17

4) Y-Loc Prediction
localization Cytoplasm
score 98
confidence value 0.82
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCATA
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.122
NLS score -0.47
Protein Sequence >LOC_Os02g02400.1 protein
MDPCKFRPSSSFDTKTTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIPERVVHARGASAKGFFECTHDVTDITCADFLRSPGAQTPVI
VRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHPESLHTFFFLFDDVGIPTDYR
HMDGFGVNTYTFVTRDAKARYVKFHWKPTCGVSCLMDDEATLVGGKNHSHATQDLYDSIAAGNFPEWKLFVQVIDPEEEERFDFDPLDDTKTWPEDEVPL
RPVGRLVLNRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPL
RHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM

GO Analysis
1
GO Category Biological Process
GO Term response to extracellular stimulus
2
GO Category Biological Process
GO Term cell communication
3
GO Category Biological Process
GO Term response to stress
4
GO Category Biological Process
GO Term response to abiotic stimulus
5
GO Category Cellular comBiological Processonent
GO Term peroxisome
6
GO Category Biological Process
GO Term metabolic process
7
GO Category Molecular Function
GO Term binding
8
GO Category Biological Process
GO Term response to endogenous stimulus
9
GO Category Biological Process
GO Term biological_process
10
GO Category Cellular comBiological Processonent
GO Term cell wall
11
GO Category Molecular Function
GO Term catalytic activity
12
GO Category Cellular comBiological Processonent
GO Term mitochondrion
13
GO Category Cellular comBiological Processonent
GO Term plastid
14
GO Category Cellular comBiological Processonent
GO Term ribosome
15
GO Category Cellular comBiological Processonent
GO Term cytosol
Presence of Splice variants YES