LOC_Os02g01590

Expression Profile

RGAP LOCUS ID

LOC_Os02g01590

RAP-DB ID

Os02g0106100

Function

glycosyl hydrolases, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization

plas

score

2) CELLO Prediction

localization

Vacuole

score

2.558

3) NUCPRED Prediction

localization

Non Nuclear

score

0.23

4) Y-Loc Prediction

localization

Secreted pathw

score

confidence value

0.07

Number Of Software Predicting Nucleus

Seed Specific

Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020)

OSINV3|OsVIN2

Function assigned as per literature

OsVIN2 is involved in sugar metabolism, and thus regulates grain size in rice.

Subcellular localization as per literature

Vacuolar lumen

Cells used for localization experiment

Roots of 35S::OsVIN2-GFP transgenic plants

NUCLEAR or Not Nuclear

NOT NUCLEAR

PMID

31321495

Reference of localization

https://link.springer.com/article/10.1007%2Fs00299-019-02443-9

Is Subcellular localization evidence by author available ?

Sequence Analysis

Number of PAT4

Number of PAT7

Number of Bipartite

Basic residues %

0.091

NLS score

0.71

Protein Sequence

>LOC_Os02g01590.1 protein
METRDDVADASALPYSYSPLPAGDAASADLAAARRSRRRPLCVALFLASAAVILAVAVLSGVRLAGRPATTTMVVPGVVEMEMASRGPESGVSEKTSGAE
EMVRLMGGAAGGEAFPWSNAMLQWQRTGFHFQPERNWMNDPNGPVYYKGWYHLFYQYNPDGAVWGNKIAWGHAVSRDLVHWRHLPLAMVPDQWYDVNGVW
TGSATTLPDGRLAMLYTGSTNASVQVQCLAVPSDPDDPLLTNWTKYHANPVLYPPRTIGDRDFRDPTTAWRDPSDGDWRIVIGSKDEHHAGIAVVYRTAD
FVTYDLLPGLLHRVEATGMWECIDFYPVAGGEGVDMTEAMYARNKGVVHVMKASMDDDRHDYYALGRYDPARNAWTPLDAAADVGIGLRYDWGKFYASKT
FYDPAKRRRVLWGWVGETDSERADVAKGWASLQSIPRTVELDTKTGSNLLQWPVEEVETLRTNSTDFGGITVDYASVFPLNLHRATQLDILAEFQLDPLA
VDAVLEADVGYNCSTSGGAAGRGALGPFGLLVLADKRHRGDGEQTAVYFYVAKGSDGGVTTHFCQDESRSSHADDIVKRVVGNVVPVLDGETFSLRVLVD
HSIVESFAQGGRSTATSRVYPTEAIYANAGVFLFNNATSARVTAKKLVVHEMDSSYNQAYMA

GO Analysis

GO Category	Molecular Function
GO Term	hydrolase activity

GO Category	Biological Process
GO Term	metabolic process

GO Category	Biological Process
GO Term	carbohydrate metabolic process

GO Category	Cellular comBiological Processonent
GO Term	vacuole

Presence of Splice variants

YES