LOC_Os02g01440

Expression Profile

RGAP LOCUS ID LOC_Os02g01440
RAP-DB ID Os02g0104700
Function nitric oxide synthase 1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 11

2) CELLO Prediction
localization Mitochondrial
score 2.171

3) NUCPRED Prediction
localization Non Nuclear
score 0.47

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.39
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsNOA1
Function assigned as per literature OsNOA1 functions in a temperature-dependent manner to regulate chlorophyll biosynthesis, Rubisco formation and plastid development in rice
Subcellular localization as per literature Chloroplast
Cells used for localization experiment Arabidopsis leaf protoplasts and rice stem protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 21625436
Reference of localization https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0020015
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 4
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.128
NLS score 1.09
Protein Sequence >LOC_Os02g01440.1 protein
MAAPPLLSLSQRLLFLSLSLPKPQLAPNPSSFSPTRAASTAPPPPEGAGPAAPSRGDRFLGTQLAAEAAARVLAPEDAERRRRRREKRKALARKPSAAAC
YGCGAPLQTADEAAPGYVHPATYDLKKRHHQLRTVLCGRCKLLSHGHMITAVGGHGGYPGGKQFVSADQLRDKLSYLRHEKALIIKLVDIVDFNGSFLAR
VRDFAGANPIILVITKVDLLPRDTDLNCIGDWVVEAVVKKKLNVLSVHLTSSKSLVGVTGVISEIQQEKKGRDVYILGSANVGKSAFISAMLRTMAYKDP
VAAAAQKYKPIQSAVPGTTLGPIQIEAFLGGGKLYDTPGVHLHHRQAAVIHADDLPSLAPQSRLRARCFPANDTDVGLSGNSLFWGGLVRIDVVKALPRT
RLTFYGPKKLKINMVPTTEADEFYEREVGVTLTPPAGKEKAEGWVGLQGVRELQIKYEESDRPACDIAISGLGWVAVEPLGVPSSNPDESAEEEDNESGE
LHLRVHVPKPVEIFVRPPLPVGKAASQWYRYQELTEEEEELRPKWHY

GO Analysis
1
GO Category Biological Process
GO Term cellular component organization
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term carbohydrate metabolic process
5
GO Category Biological Process
GO Term lipid metabolic process
6
GO Category Biological Process
GO Term catabolic process
7
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
8
GO Category Biological Process
GO Term protein metabolic process
9
GO Category Biological Process
GO Term biological_process
10
GO Category Molecular Function
GO Term hydrolase activity
11
GO Category Biological Process
GO Term response to stress
12
GO Category Cellular comBiological Processonent
GO Term mitochondrion
13
GO Category Molecular Function
GO Term nucleotide binding
14
GO Category Biological Process
GO Term multicellular organismal development
15
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No