LOC_Os02g01070

Expression Profile

RGAP LOCUS ID LOC_Os02g01070
RAP-DB ID Os02g0100700
Function FG-GAP repeat-containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 13

2) CELLO Prediction
localization Nuclear
score 1.172

3) NUCPRED Prediction
localization Non Nuclear
score 0.23

4) Y-Loc Prediction
localization Nuclear
score 96.05
confidence value 0.34
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) DPW3
Function assigned as per literature DPW3 is required for pollen wall formation in rice.
Subcellular localization as per literature Plasma membrane, endoplasmic reticulum (ER) and Golgi
Cells used for localization experiment Nicotiana benthamiana epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 31486533
Reference of localization https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.16161
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 4
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.101
NLS score 0.94
Protein Sequence >LOC_Os02g01070.1 protein
MRKRDLGILLLAAFAVFFSLQHDGDLSFREAWYHLSDADYPIKHDADRLPSPLVADLNGDGKPEVLIPTHDAKIQVLQPHPRPSPDDASFHDARLMADVS
LLPSNVRLSSGRRPVAMAVGTVDRHYAHAPSPSKQLLVVVTSGWSVMCFDHNLKKLWEANLQDDFPHAAHHREVAISITNYTLKHGDAGLVIVGGRMEMQ
HHSAELFDEFMVSEHNREEHRRSASEKQASETGNTDLRHFALYAFAGRTGELRWSRKNENIPSQPSDASVLIPQHNYKLDAHALNSRHPGQFECREFRES
VLGVMPHHWDRREDTFLQLAHFRRHKRKALKKTPGKAVVNNVHKPSEHNPPGKDVSNRLANVIGKAADMANSNKIKKSQRTLYVPTITNYTQVWWVPNVV
VAHEKEGIEAVHLASGRTICKLHLTEGGLHADINGDGVLDHVQVVGANGIEQTVVSGSMEVLKPCWAVATSGVPVREQLFNVSICHYNNFNLFHHGDFSR
SFGRTFDTTGLEVATPILLQRDDGHKHRRGSHGDIIFLTSRGEVTSYSPGLLGHDAIWRWQLSTGATWSNLPSPSGMMENIVVPTLKAFSLRAYDPKQVI
IAGGDLEAVVISPSGGLLASIELPAPPTHALVLEDFNGDGLTDIILVTSGGVYGFVQTRHPGALFFSTLVGCLIVVIGVIFVSLHLNSSNSGKPRASTDY
R

GO Analysis
1
GO Category Biological Process
GO Term cellular process
2
GO Category Molecular Function
GO Term molecular_function
3
GO Category Cellular comBiological Processonent
GO Term membrane
4
GO Category Cellular comBiological Processonent
GO Term vacuole
5
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No