LOC_Os01g74146

Expression Profile

RGAP LOCUS ID LOC_Os01g74146
RAP-DB ID Os01g0972900
Function WD repeat-containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 5.5

2) CELLO Prediction
localization Nuclear
score 2.988

3) NUCPRED Prediction
localization Non Nuclear
score 0.52

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.07
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCCS52B
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.111
NLS score -0.47
Protein Sequence >LOC_Os01g74146.1 protein
MATDASPKPAPPRLNVPPAMAGGLRLDPAVASPARLLLDVPKTPSPSKTTYSDRFIPCRSSSRLHNFALLDRDRASPSSTTDDAPYSRLLRAEIFGPDSP
SPAPSSPNTNLFRFKTDHPSPKSPFAASAAATAGHYDCTAGSAESSTPRKPPRKVPKTPHKVLDAPSLQDDFYLNLVDWSSQNTLAVGLGNCVYLWSASN
CKVTKLCDLGPRDSVCAVHWTREGSYLAIGTSLGDVQIWDSSRCKRIRNMGGHQTRTGVLAWSSRILSSGSRDKNILQHDIRVPSDYISKFSGHRSEVCG
LKWSHDDRELASGGNDNQLLVWNQRSQQPILRLTEHTAAVKAIAWSPHQQGLLASGGGTADRCIRFWNTVNGNMLNSVDTGSQVCNLAWCKNVNELVSTH
GYSQNQIMVWKYPSMSKVATLTGHTLRVLYLAMSPDGQTIVTGAGDETLRFWNIFPSMKTQAPVRDIGLWSFSRSHIR

GO Analysis
1
GO Category Biological Process
GO Term signal transduction
2
GO Category Cellular comBiological Processonent
GO Term intracellular
3
GO Category Cellular comBiological Processonent
GO Term plasma membrane
4
GO Category Molecular Function
GO Term signal transducer activity
5
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No