LOC_Os01g73770

Expression Profile

RGAP LOCUS ID LOC_Os01g73770
RAP-DB ID Os01g0968800
Function dehydration-responsive element-binding protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 14

2) CELLO Prediction
localization Nuclear
score 2.595

3) NUCPRED Prediction
localization Non Nuclear
score 0.58

4) Y-Loc Prediction
localization Nuclear
score 91.29
confidence value 0.3
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category AP2-EREBP/ERF

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsDREB1F|RCBF2
Function assigned as per literature OsDREB1F gene play a role in salt, drought, and low temperature tolerance in both Arabidopsis and rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment Onion epidermis cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 18470484
Reference of localization https://link.springer.com/article/10.1007%2Fs11103-008-9340-6
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.123
NLS score 0.64
Protein Sequence >LOC_Os01g73770.1 protein
MDTEDTSSASSSSVSPPSSPGGGHHHRLPPKRRAGRKKFRETRHPVYRGVRARAGGSRWVCEVREPQAQARIWLGTYPTPEMAARAHDVAAIALRGERGA
ELNFPDSPSTLPRARTASPEDIRLAAAQAAELYRRPPPPLALPEDPQEGTSGGGATATSGRPAAVFVDEDAIFDMPGLIDDMARGMMLTPPAIGRSLDDW
AAIDDDDDHYHMDYKLWMD

GO Analysis
1
GO Category Molecular Function
GO Term DNA binding
2
GO Category Cellular comBiological Processonent
GO Term nucleus
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
5
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
6
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No