LOC_Os01g72570

Expression Profile

RGAP LOCUS ID LOC_Os01g72570
RAP-DB ID Os01g0955700
Function expressed protein

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization PlasmaMembrane
score 4.844

3) NUCPRED Prediction
localization Non Nuclear
score 0.09

4) Y-Loc Prediction
localization Chloroplast
score 8
confidence value 0.41
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCLT1
Function assigned as per literature OsCLT1 plays an important role in glutathione homeostasis
Subcellular localization as per literature Chloroplasts
Cells used for localization experiment Nicotiana benthamiana leaves
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 26918637
Reference of localization https://nph.onlinelibrary.wiley.com/doi/full/10.1111/nph.13908
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 1
Basic residues % 0.077
NLS score 0.36
Protein Sequence >LOC_Os01g72570.1 protein
MASSTTTAPPVSCRPSTARGRLLRLLPANGPAAAMELLPTVRRREAVRAAHVRRIEAAAWLGARRATRREDAAARCAAAGEVVGSAAGVGRSAGMEVAIA
TAAVVAMGTGNRVLYKLALVPLRDYPFFLAQLATFGYVVVYFSILYLRHQAGIVTDEMLSLPQKPFLAVGLLEALSAASGMAAGAVLSGASIPILSQTYL
VWQLLLSAIFLKRRYRINEITGCFLVTVGVIITVASGSSAGASLKGTGILWPLLMIISFFLQAADTVLKEIIFLNAAKKLKGGSVDLFVVNSYGSAYQAL
FMCLLLPFLSKLWGVPFHQLPTYIRDGTACFLNMGSLSSGCEGAPLLPLLFVLVNMGFNISLLHLLKISSAVVSSLASTFSVPLSIYAFTLPLPYIGVAS
TLPPGFVAGAMVLTAGLLLYSFPQAQKNPGNPSPAGIPS

GO Analysis
1
GO Category Biological Process
GO Term biological_process
2
GO Category Biological Process
GO Term transport
3
GO Category Cellular comBiological Processonent
GO Term plastid
4
GO Category Biological Process
GO Term response to stress
5
GO Category Biological Process
GO Term response to biotic stimulus
Presence of Splice variants YES