LOC_Os01g71960

Expression Profile

RGAP LOCUS ID LOC_Os01g71960
RAP-DB ID Os01g0948100
Function endonuclease, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 7

2) CELLO Prediction
localization Nuclear
score 3.093

3) NUCPRED Prediction
localization Non Nuclear
score 0.52

4) Y-Loc Prediction
localization Nuclear
score 55.86
confidence value 0.34
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMUS81
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.126
NLS score -0.47
Protein Sequence >LOC_Os01g71960.1 protein
MAPEARQLKVHLRENEAVAQCVLEKWRSMEEKPGGLKENLAHTLYKSYRNVCAAKEPIRSLKDLYQIKGVGKWVIRQLKGSFPESSPDLSPPESNAAGEK
GKKAGGSKRYVPQKNSAAYAILITLHRETINGKSHMKKQELIDATEASGLSRSAIGPDKSKAKPGAFASSQKDWYTGWSCMKTLTSKGLVAKSGNPAKYM
ITEEGKSTALECLSRSGLDDHAAPLVINSAPDTSNASHKLNNICMTSFVETSSGPSRAIGRPKTSIANPATKTSPEVTYLTSQESLNYNSDVRTAENCAE
EIILSDSDSEELYTENYPLIGSEEFTERVAPPILNASNSGKTTTNYRFSDCSASISPRSSEGTFEMQSSSTMGIAEFNMLDNDTVCMDNSILAMPPRRSS
KNFLEDYEVVLILDDRENFGGRSRKTVDNIHSQFRVPVEIKHLPVGDGIWIARDRKLHTEYVLDFIVERKNVADLCSSITDNRYKDQKLRLKKCGLRKLI
YLVEGDPNPLDTSERIKTACFTTEILEGFDVQRTPGYAETVRTYGNLTHSITEYYSTHFSTGANTSQVCLTYDEFTKKCDDLKKITVSDVFALQLMQVPQ
VTEEAALAVIGLYPTLFSLAKAYSMLDGDTHAQEKMLKNKSTLINAGASRNIFKLVWAEG

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Biological Process
GO Term DNA metabolic process
3
GO Category Cellular comBiological Processonent
GO Term nucleus
4
GO Category Biological Process
GO Term cellular component organization
5
GO Category Biological Process
GO Term cell cycle
6
GO Category Molecular Function
GO Term nuclease activity
7
GO Category Molecular Function
GO Term nucleic acid binding
Presence of Splice variants No