LOC_Os01g71310

Expression Profile

RGAP LOCUS ID LOC_Os01g71310
RAP-DB ID Os01g0940000
Function cytokinin dehydrogenase precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 3

2) CELLO Prediction
localization Mitochondrial
score 1.9

3) NUCPRED Prediction
localization Non Nuclear
score 0.07

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.2
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCKX4
Function assigned as per literature OsCKX4 mediates crown root development by integrating the interaction between cytokinin and auxin
Subcellular localization as per literature Cytosol
Cells used for localization experiment Rice protoplast
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 24808099
Reference of localization http://www.plantphysiol.org/content/165/3/1035
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.098
NLS score -0.29
Protein Sequence >LOC_Os01g71310.1 protein
MRGAMKPSIVHCLKLLMLLALGGVTMHVPDEDDVVASLGALRLDGHFSFDDAHAAARDFGNRCSLLPAAVLHPGSVSDVAATVRRVFQLGRSSPLTVAAR
GHGHSLLGQSQAAGGIVVKMESLAAAAARAVRVHGGASPHVDAPGGELWINVLHETLKHGLAPRSWTDYLHLTVGGTLSNAGVSGQAFRHGPQVSNVNQL
EIVTGRGEVVTCSHEVNSDLFYAALGGLGQFGIITRARIALEPAPKMVRWIRVLYSDFETFTEDQEKLIASEKTFDYIEGFVIINRTGILNNWRTSFKPQ
DPVQASQFQSDGRVLYCLELTMNFNHDEADIMEQEVGALLSRLRYISSTLFYTDVTYLEFLDRVHTSELKLRAQGLWEVPHPWLNLLIPRSTVHKFAKEV
FGKILKDSNNGPILLYPVNRTKWDNRTSVVIPDEEIFYLVGFLSSAPSSSGHGSVEHAMNLNNKIVDFCEKNGVGMKQYLAPYTTQKQWKAHFGARWETF
ERRKHTYDPLAILAPGQRIFPKASLPMSL

GO Analysis
1
GO Category Molecular Function
GO Term catalytic activity
2
GO Category Biological Process
GO Term multicellular organismal development
3
GO Category Biological Process
GO Term cellular process
4
GO Category Biological Process
GO Term catabolic process
5
GO Category Biological Process
GO Term biosynthetic process
6
GO Category Biological Process
GO Term protein modification process
7
GO Category Biological Process
GO Term metabolic process
8
GO Category Cellular comBiological Processonent
GO Term vacuole
Presence of Splice variants No