LOC_Os01g71000

Expression Profile

RGAP LOCUS ID LOC_Os01g71000
RAP-DB ID Os01g0936100
Function protein kinase APK1B, chloroplast precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 10

2) CELLO Prediction
localization Nuclear
score 2.98

3) NUCPRED Prediction
localization Non Nuclear
score 0.57

4) Y-Loc Prediction
localization Chloroplast
score 8
confidence value 0.23
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsRLCK55
Function assigned as per literature
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 23498959
Reference of localization https://www.cell.com/cell-host-microbe/fulltext/S1931-3128(13)00073-5
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.141
NLS score -0.22
Protein Sequence >LOC_Os01g71000.1 protein
MSCFLCFGSAQEGEAKKPGADSKDARKDGSADRGVSRVGSDKSRSHGGLDSKKDVVIQRDGNNQNIAAQTFTFRELAAATKNFRQDCLLGEGGFGRVYKG
RLETGQAVAVKQLDRNGLQGNREFLVEVLMLSLLHHTNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDK
ASPPVIYRDFKSSNILLGEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDNTKPQGEQNLVAW
ARPLFKDRRKFPKMADPMLQGRFPMRGLYQALAVAAMCLQEQATTRPHIGDVVTALSYLASQTYDPNAPVQHSRSNSSTPRARNLAGWNEDRRSVRSPNH
HSPDLRREAARSSRAEVSRTSSTGDSGRRSGLDDLDMTGSQMGSPAQTGRKRETPRTADRQRAIAEAKTWGENSRERKHPNGHGSFDSTNE

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term kinase activity
4
GO Category Molecular Function
GO Term nucleotide binding
5
GO Category Biological Process
GO Term protein modification process
6
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No