LOC_Os01g70220

Expression Profile

RGAP LOCUS ID LOC_Os01g70220
RAP-DB ID Os01g0927000
Function histone-lysine N-methyltransferase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 9

2) CELLO Prediction
localization Nuclear
score 3.296

3) NUCPRED Prediction
localization Non Nuclear
score 0.59

4) Y-Loc Prediction
localization Nuclear
score 100
confidence value 0.98
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category SET

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) SDG714
Function assigned as per literature SDG714 mediates H3K9 methylation and is involved in DNA methylation, the transposition of transposable elements, and genome stability in rice.
Subcellular localization as per literature Nucleus
Cells used for localization experiment onion (Allium cepa) epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 17259261
Reference of localization http://www.plantcell.org/content/19/1/9.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 1
Basic residues % 0.127
NLS score 0.68
Protein Sequence >LOC_Os01g70220.1 protein
MEVMDSVAVMEVSPVPKPPLEAALALRRSVRCLNRTRRPTYVEQEEPKESAGRRRGGKRKREEEKKEPVAQHAMKPVRMGDAASERKPSSEGKPMPAIAA
EPVSCAGFARPAAEDDVLGNGKSAKLRVKETLRAFTSHYLHLVQEEQKRAQAVLQEGQKRPSKRPDLKAITKMQESNAVLYPEKIIGELPGVDVGDQFYS
RAEMVVLGIHSHWLNGIDYMGMKYQGKEEYANLTFPLATCIVMSGIYEDDLDKADEIIYTGQGGNDLLGNHRQIGSQQLQRGNLALKNSKDNGNPIRVIR
GHISKNSYTGKVYTYDGLYKVVDDWVQNGVQGHVVFKYKLKRLEGQPSLTTSEVRFTRAEAPTTISELPGLVCDDISGGQENLPIPATNLVDDPPVPPTG
FVYSKSLKIPKGIKIPSYCNGCDCEGDCANNKNCSCAQRNGSDLPYVSHKNIGRLVEPKAIVFECGANCSCNNNCVNRTSQKGLQYRLEVFKTASKGWGV
RTWDTILPGAPICEYTGVLRRTEEVDGLLQNNYIFDIDCLQTMKGLDGREKRAGSDMHLPSLHAENDSDPPAPEYCIDAGSIGNFARFINHSCEPNLFVQ
CVLSSHNDVKLAKVTLFAADTILPLQELSYDYGYVLDSVVGPDGNIVKLPCFCGAPYCRKRLY

GO Analysis
1
GO Category Biological Process
GO Term regulation of gene expression, epigenetic
2
GO Category Biological Process
GO Term DNA metabolic process
3
GO Category Biological Process
GO Term cellular component organization
4
GO Category Biological Process
GO Term protein modification process
5
GO Category Cellular comBiological Processonent
GO Term nucleus
6
GO Category Molecular Function
GO Term DNA binding
7
GO Category Molecular Function
GO Term nucleotide binding
8
GO Category Molecular Function
GO Term transferase activity
Presence of Splice variants No