LOC_Os01g70200

Expression Profile

RGAP LOCUS ID

LOC_Os01g70200

RAP-DB ID

Os01g0926700

Function

exostosin family domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization

plas

score

6.5

2) CELLO Prediction

localization

PlasmaMembrane

score

0.976

3) NUCPRED Prediction

localization

Non Nuclear

score

0.07

4) Y-Loc Prediction

localization

Secreted pathw

score

confidence value

0.95

Number Of Software Predicting Nucleus

Seed Specific

Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020)

OsIRX10

Function assigned as per literature

OsIRX10 is involved in xylan biosynthesis

Subcellular localization as per literature

Golgi apparatus

Cells used for localization experiment

Onion epidermal cells

NUCLEAR or Not Nuclear

NOT NUCLEAR

PMID

23180670

Reference of localization

https://www.cell.com/action/showPdf?pii=S1674-2052%2814%2960112-X

Is Subcellular localization evidence by author available ?

Sequence Analysis

Number of PAT4

Number of PAT7

Number of Bipartite

Basic residues %

0.098

NLS score

-0.47

Protein Sequence

>LOC_Os01g70200.1 protein
MRRWVLAIAILAAAVCFFLGAQAQEVRQGHQTERISGSAGDVLEDDPVGRLKVYVYDLPSKYNKKLLKKDPRCLNHMFAAEIFMHRFLLSSAVRTFNPEE
ADWFYTPVYTTCDLTPSGLPLPFKSPRMMRSAIELIATNWPYWNRSEGADHFFVTPHDFGACFHYQEEKAIGRGILPLLQRATLVQTFGQKNHVCLKDGS
ITIPPYAPPQKMQAHLIPPDTPRSIFVYFRGLFYDTSNDPEGGYYARGARASVWENFKNNPLFDISTDHPPTYYEDMQRSVFCLCPLGWAPWSPRLVEAV
VFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEDVPKLDSILTSIPTDVILRKQRLLANPSMKQAMLFPQPAQAGDAFHQILNGLARKLPHGENVFLKPG
ERALNWTAGPVGDLKPW

GO Analysis

GO Category	Cellular comBiological Processonent
GO Term	cell

GO Category	Cellular comBiological Processonent
GO Term	membrane

GO Category	Molecular Function
GO Term	transferase activity

GO Category	Biological Process
GO Term	metabolic process

GO Category	Molecular Function
GO Term	catalytic activity

GO Category	Biological Process
GO Term	cellular process

GO Category	Biological Process
GO Term	biosynthetic process

GO Category	Biological Process
GO Term	carbohydrate metabolic process

Presence of Splice variants