LOC_Os01g70190

Expression Profile

RGAP LOCUS ID LOC_Os01g70190
RAP-DB ID Os01g0926600
Function exostosin family domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 5.5

2) CELLO Prediction
localization Cytoplasmic
score 0.874

3) NUCPRED Prediction
localization Non Nuclear
score 0.08

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.35
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsGT47A
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.099
NLS score -0.47
Protein Sequence >LOC_Os01g70190.1 protein
MAMRLSSAAVALALLLAATALEDVARGQDTERIEGSAGDVLEDDPVGRLKVYVYELPTKYNKKMVAKDSRCLSHMFAAEIFMHRFLLSSAIRTLNPEEAD
WFYTPVYTTCDLTPWGHPLPFKSPRIMRSAIQFISSHWPYWNRTDGADHFFVVPHDFGACFHYQEEKAIERGILPLLRRATLVQTFGQKDHVCLKEGSIT
IPPYAPPQKMKTHLVPPETPRSIFVYFRGLFYDTANDPEGGYYARGARASVWENFKNNPLFDISTDHPPTYYEDMQRSIFCLCPLGWAPWSPRLVEAVVF
GCIPVIIADDIVLPFADAIPWDEIGVFVAEDDVPKLDTILTSIPMDVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQILNGLGRKLPHPKSVYLDPGQK
VLNWTQGPVGDLKPW

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Molecular Function
GO Term transferase activity
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Molecular Function
GO Term catalytic activity
6
GO Category Biological Process
GO Term cellular process
7
GO Category Biological Process
GO Term biosynthetic process
8
GO Category Biological Process
GO Term carbohydrate metabolic process
Presence of Splice variants No