LOC_Os01g69920

Expression Profile

RGAP LOCUS ID LOC_Os01g69920
RAP-DB ID Os01g0923700
Function histidine kinase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization E.R.
score 5

2) CELLO Prediction
localization PlasmaMembrane
score 1.016

3) NUCPRED Prediction
localization Non Nuclear
score 0.2

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.1
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category Orphans

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OHK2|OsHk3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.12
NLS score -0.47
Protein Sequence >LOC_Os01g69920.1 protein
MDEMSCGGGGGGARWKRARVAGMGEGKAGGGGGAAFLGLERVGMVVRMLPVPEKVSARARVVRGSLVAHFRGWRVVRETWWWVLLLWILAGSLGSFYLFL
FMNAQSLDKRRDSLASMCDERARMLQDQFNVSMNHLQALAILVSTFHHSKTPSAIDQMTFARYAERTAFERPLTSGVAYAVRVTHGEREQFERQQGWAIK
KMYSSSNKKQSSPGPGPGDAAVAEIREPAEEYAPVIFAQDAYKHVISFDMLSGNEDRDNILRARKSGKGVLTAPFKLLNNRLGVILTYTVYKYELPAYAR
PHERIQAAIGYLGGIFDIQALVEKLLKQLASQESIMVNVYDTTNESPISMYGDDTGSGMCHVSVLNFGDPSRKHEMHCRFEKKPPWPWLAITSSFGTLVI
ALLTGHIFQATVHRIAKVEDDFHKMSELKKRAEDADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTDLDTTQQDYVRTAQASGKALVSLINEVLDQAKI
ESGKLELETVPFDLRTVCDDILSLFCGKAQEKGLELAVYVSDQVPQILIGDPGRIRQIITNLVGNSIKFTERGHIYLTVHVVEEVMSCLEVETGIQNTNT
LSGYPVANRRCSWESIRLFNRELHSSEKSFAPIASDSISLVISVEDTGVGIPFEAQSRVFTPFMQVGPSIARIHGGTGIGLSISKCLVGLMKGEIGFASK
PHVGSTFTFTAVLMRAHCKGNDIKSSEFKGINALVVDHRPVRAKVTKYHLQRLGVKTELTAELNQFISKLNSGSLTAKLVLIDKETWLKESHCTPLLVNK
LRNNDKPDSPKLFLLGSSASSPKGGSDTSREHNLNVIMKPLRASMLQVSLRRALGGVDKVHCRNGVVGNSTLGSLLHKKQIIVVDDNIVNLKVAAGALKK
YGAEVTCADSGKKAITLLKPPHNFDACFMDIQMPEMDGFEATRRIRVMERDLNERIERGEAPPECASIQRWRTPILAMTADVIQATHEECLKSEMDGYVS
KPFEGEQLYSEVARFFQNHDQVE

GO Analysis
1
GO Category Biological Process
GO Term cellular process
2
GO Category Biological Process
GO Term response to stress
3
GO Category Biological Process
GO Term response to abiotic stimulus
4
GO Category Biological Process
GO Term multicellular organismal development
5
GO Category Molecular Function
GO Term receptor activity
6
GO Category Molecular Function
GO Term signal transducer activity
7
GO Category Biological Process
GO Term flower development
8
GO Category Biological Process
GO Term response to biotic stimulus
9
GO Category Molecular Function
GO Term kinase activity
10
GO Category Biological Process
GO Term transport
11
GO Category Biological Process
GO Term catabolic process
12
GO Category Biological Process
GO Term signal transduction
13
GO Category Biological Process
GO Term response to endogenous stimulus
14
GO Category Molecular Function
GO Term protein binding
15
GO Category Cellular comBiological Processonent
GO Term plasma membrane
16
GO Category Biological Process
GO Term growth
17
GO Category Biological Process
GO Term biological_process
18
GO Category Biological Process
GO Term response to extracellular stimulus
19
GO Category Biological Process
GO Term cell communication
20
GO Category Biological Process
GO Term protein modification process
21
GO Category Biological Process
GO Term post-embryonic development
Presence of Splice variants YES