LOC_Os01g67980

Expression Profile

RGAP LOCUS ID LOC_Os01g67980
RAP-DB ID Os01g0907600
Function cysteine proteinase EP-B 1 precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization vacu
score 6

2) CELLO Prediction
localization Cytoplasmic
score 0.813

3) NUCPRED Prediction
localization Non Nuclear
score 0.11

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.65
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) REP-1|OsEP3A|OsSAG12-1
Function assigned as per literature OsSAG12-1 is a negative regulator of cell death in rice
Subcellular localization as per literature NOT RESTRICTED TO VACUOLAR COMPARTMENTS
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 23938390
Reference of localization https://www.ias.ac.in/article/fulltext/jbsc/038/03/0583-0592
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.116
NLS score -0.29
Protein Sequence >LOC_Os01g67980.1 protein
MGRVISSWRVLAVVAALMAMAAVELCAAIPFDERDLESDEALWDLYERWQEHHHVPRHHGEKHRRFGAFKDNVRYIHEHNKRGGRGYRLRLNRFGDMGRE
EFRATFAGSHANDLRRDGLAAPPLPGFMYEGVRDLPRAVDWRRKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGRLVSLSEQELIDCDTADNSGCQG
GLMENAFEYIKHSGGITTESAYPYRAANGTCDAVRARRAPLVVIDGHQNVPANSEAALAKAVANQPVSVAIDAGDQSFQFYSDGVFAGDCGTDLDHGVAV
VGYGETNDGTEYWIVKNSWGTAWGEGGYIRMQRDSGYDGGLCGIAMEASYPVKFSPNRVTPRRALGAKETQ

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Biological Process
GO Term protein metabolic process
3
GO Category Molecular Function
GO Term hydrolase activity
Presence of Splice variants No