LOC_Os01g67970

Expression Profile

RGAP LOCUS ID LOC_Os01g67970
RAP-DB ID Os01g0907400
Function ZOS1-20 - C2H2 zinc finger protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 4

2) CELLO Prediction
localization Nuclear
score 3.899

3) NUCPRED Prediction
localization Nuclear
score 0.88

4) Y-Loc Prediction
localization Nuclear
score 99.93
confidence value 0.91
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category C2H2

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) JMJ705
Function assigned as per literature JMJ705 is a biotic stress-responsive H3K27me2/3 demethylase that may remove H3K27me3 from marked defense-related genes and increase their basal and induced expression during pathogen infection
Subcellular localization as per literature Nuclear localized when ineracting with WOX11
Cells used for localization experiment Rice mesophyll protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 29361035
Reference of localization https://academic.oup.com/nar/article/46/5/2356/4816221
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 5
Number of PAT7 1
Number of Bipartite 1
Basic residues % 0.134
NLS score 1.7
Protein Sequence >LOC_Os01g67970.1 protein
MRPSPPPAAPAAEPVPPWLRSLPVAPEFRPTAAEFADPVSYILKIEPAAAPYGICKVVPPLPPPPKKATFSNLSRSFAALHPDDRSPSFPTRHQQVGLCP
RRTRPGLKPVWRSSHRYTLPQFESKAGATRKSLLAGLNFPASRQLTPLDHEVLFWRASADRPIVVEYGSDMSGSGFSPCAAQPQPPPQQQPTARAAAHLG
ETAWNMRGVARSPGSLLRFMPEDVPGVTTPMLYVGMMFSWFAWHVEDHDLHSLNYMHLGAAKTWYGVPRDAALAFEDVVREHGYGGEVNPLETFATLGQK
TTVMSPEVLVESGIPCCRLVQNAGEFVVTFPGSYHCGFSHGFNCGEASNIATPEWLRIAKEAAIRRASINRPPMVSHYQLLYDLALSMRFREPSNGEMET
RSSRIKEKKKCEGEQLVKKMFIQNVIEDNELLSHLLNDGSSCIILPANAHDGPGLSTLRSTDQSNMNSRISHNLCSREEAPEASGCLSPNRNGDTRNCIS
SDTHNMEGDKGDIMSATGLLDQGLLSCVTCGILSFSCVAVLKPRDSTARYLMSADSNSINNQLSISGGSILADAPTNERNGVISRPYSEHCCNEIMADDA
EIDKNSALDLLAFAHGGQPDPEEDPLEKILKIAHGINKSQPNSSNNVGCVGTKLSSSSTERQERPSSQNAHCNGSSVISNGPKGVRTRNKYQLKMVLSEG
FQAKDIYSAKEKKVQSEPSSSKGDVKETIDVSGTENDVGCKSTTISVSEHRGSTKNMYSVKEKKVQSKPSSLKGTVKETVDVSGTENDARCKSITISVSE
HRGSTPMTNSLAASIVKPDKDSSRMHVFCLEHAIEVEKQLHAIGGSNIMLICRPEYPKIEAEARLLGEEMGLVYDWKGIHFKEANMEDRQKIQEVLRDEE
AIPTSSDWAVKLGINLYYSANLAKSPLYNKQMPYNRVIYRAFGCDSPNDSPVMFNTCERKQSHQKKIVVAGRWCGKVWMSKQVHPYLAHRVESQEAEEAD
RICSYHFDEKHKAEPVGNSSRVEASKRKSSSLTDVTESSNRRGEIPGEETNTKRPKHSQENNLRALETAAEVVVPSPAGTGLRVSSRIANRANKLKSKME
KEDVPSSRPKSNIKEKSSHASGQKSNVQEANANSASHLRAMPPKQKAEAEAKKQIRTPKPPKQAVEYSCDIEGCSMSFRTKRDLSLHKSDICPVKGCGKK
FFSHKYLLQHRKVHTDDRPLTCPWKGCNMAFKWPWARTEHLRVHTGDRPYVCHEPGCAQTFRFVSDFSRHKRKTGHSVKKKKKAKS

GO Analysis
1
GO Category Biological Process
GO Term cellular component organization
2
GO Category Biological Process
GO Term anatomical structure morphogenesis
3
GO Category Biological Process
GO Term cell growth
4
GO Category Cellular comBiological Processonent
GO Term nucleus
5
GO Category Biological Process
GO Term response to endogenous stimulus
6
GO Category Biological Process
GO Term biosynthetic process
7
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
8
GO Category Biological Process
GO Term reproduction
9
GO Category Biological Process
GO Term post-embryonic development
10
GO Category Biological Process
GO Term protein modification process
11
GO Category Molecular Function
GO Term nucleic acid binding
12
GO Category Molecular Function
GO Term protein binding
13
GO Category Molecular Function
GO Term binding
14
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
15
GO Category Biological Process
GO Term multicellular organismal development
Presence of Splice variants No