LOC_Os01g67250

Expression Profile

RGAP LOCUS ID LOC_Os01g67250
RAP-DB ID Os01g0897800
Function Rad21 / Rec8 like protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Nuclear
score 3.398

3) NUCPRED Prediction
localization Nuclear
score 0.84

4) Y-Loc Prediction
localization Cytoplasm
score 64
confidence value 0.1
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsRAD21-1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 3
Number of PAT7 2
Number of Bipartite 2
Basic residues % 0.081
NLS score 2.06
Protein Sequence >LOC_Os01g67250.1 protein
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSIIFPEVPIALRLSSHLMLGVVRIYSRKVNYLFHDCSEALLKIKQAFRSTAVDLPPEE
STAPYHSITLPETFHLDDFELPEAAFQGDIDHHVSTKEQITLQDNPEKTGYSTSQFGLDERFGDGNSSHIGLDLEEELMLNKDQSIQLEADDGIIIQGRS
AVHPTDMEVDDNQNKDESAEGYNMEDGPSSHNKLNPLSADGLVGNSLPNWHTYNVQTPDLNDMLLNNDGNAGPSASYYQPSPFPCDEPASPEFVSAQAPA
TPGLMEETVPSRVHESPVLSPQRKASPSSNDETAKTAENANDLVGAETTELALTKPVQIESSGAVQEIDSLSQQCATEELPPQAETSNLEATMDKSMINT
DGVAASGEATAAKETTEVSLVENSLELCADGPTEPVIENQTQFNDGSVDVQGGGQHAPHAILATADSQVNVEASTQEMASNDIPSDLPTLEFPEREKMLS
APDVELYQANDLGQVTAEKGTTESDGSNKVGSLTSRKRHLEDSLPALESATTEKLSSRPRGKRTIDGIPDDDDLLASILVGRRTPGLRLDSTPIPPKTSS
LKRPRLTSKSTTPKRKVQMDDAMVIHADTIRQQLISTEDIRRIRKKAPCTRSEIWMIEKGSLEDDIFHEPIFSCMCKELNDLQYRTYEIVAHPTIHNMEI
HVRLDMSQTMADGSNDVGTSGAKDSGNHQDHVVLPDGAESDAMHPEATDAADTRTDFDSHMPSDKQVNNVEGVTEQLTDNEKETAVVEKATTNMGDSAQV
DSLDKEYLQDVPADLQRSTNTNTPLFVLDDMPGPDVVLDSSDPVSAQAVDDMKGELSDIVHDNVNAFDNKDMPTSEITVLEFTQNASGFPQPTEDENVLS
AMGENSGLQENHVGSVMDLDNMGHDFSLKECSDFGSAIQGVDTDFLMYDDEVDCDEANDDEPNPEEFQSLDNSGWSSRTRGVARYLKTLFDEESGLGRKS
VAIDHLLSGKTRKEASRMFFETLVLTTKDFISVDQPNSFDFVSVKPGPKLLKSDF

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term nucleus
3
GO Category Biological Process
GO Term cellular component organization
4
GO Category Biological Process
GO Term cell cycle
Presence of Splice variants YES