LOC_Os01g67240

Expression Profile

RGAP LOCUS ID LOC_Os01g67240
RAP-DB ID Os01g0897700
Function formin-like protein 1 precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 11

2) CELLO Prediction
localization Nuclear
score 3.306

3) NUCPRED Prediction
localization Non Nuclear
score 0.67

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.07
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsFH1
Function assigned as per literature OsFH1 plays a significant role in root-hair elongation in a growth condition-dependent manner
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Roots of transgenic rice plants
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 23334469
Reference of localization https://link.springer.com/article/10.1007/s00425-013-1838-8
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 4
Number of Bipartite 0
Basic residues % 0.114
NLS score 1.49
Protein Sequence >LOC_Os01g67240.1 protein
MPSLRRFLELVVVGIVVCGVNGGSDGLEVAVARRQLHQPFFPDQSSSPPTPAPPGPAPPFFPALPVPPPPPATAGQEQPTYPALVLPNTGAGGAAATAAP
DGGGGGGGGARKSKSSASKLVPAIVLPLLTVAVLGLSIAFFFTHRRGNAARGGGGGGGCVGGGDAKFLHPERASLFARDEFGGSGGAAAPPAAAMDYRYV
GNAGIGRMDEKSSETTSSGDEASRSTGGSPELRPLPPLLARQCGPMGARSPGSGVGGFASPSSGDEEFYSPQGSSKMSTSHRTLAAAVEAAVAARDRSKS
PSPGSIVSTPSYPSSPGATMSPAPASPPLFSSPGQSGRRSVKSRSDSVRTFGQPPAPPPPPPFAPTLPPPPPPRRKPPSPSPPSSPLIENTSALRSTTTT
DTTIPRNPFVQPPPPPTHTHGPPPPPPPPPPPPVGYWESRVRKPGTGTSKETRSPALSPPPQAASFKSGLPTDAFPGRLADNADHAAAAAAGGGGDKSEE
TTPRPKLKPLHWDKVRASSDRVMVWDQLKSSSFQVNEEMIETLFICNPANSAPPKEPATRRPVLPTPKTDNKVLDPKKSQNIAILLRALNVSKEQVCDAL
CEGNTENFGAELLETLLKMAPTKEEEIKLREFKEETSPIKLGPAEKFLKAVLDIPFAFKRVDAMLYIANFESEVNYLKKSFETLETACDELRNSRLFLKL
LEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGTDGKTTLLHFVVQEIIRTEGSHLSASNQSTPRTQANPLRDELECKKLGLQVVAGLGNELSNVKK
AAAMDSDVLSSYVSKLAGGIEKITEVLRLNEEVKSREDAWRFHDSMQKFLKRADDDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVVRDFL
SVLDQVCKEVGRINDRTIASSVRHFPVPVNPMMPQLFPRIHALRAGISDDESSATSASSP

GO Analysis
1
GO Category Molecular Function
GO Term protein binding
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Biological Process
GO Term cellular component organization
4
GO Category Biological Process
GO Term cellular process
5
GO Category Cellular comBiological Processonent
GO Term cell wall
6
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No