LOC_Os01g67160

Expression Profile

RGAP LOCUS ID LOC_Os01g67160
RAP-DB ID Os01g0897000
Function cyclin-dependent kinase B1-1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 12

2) CELLO Prediction
localization Cytoplasmic
score 3.807

3) NUCPRED Prediction
localization Non Nuclear
score 0.08

4) Y-Loc Prediction
localization Nuclear
score 50.89
confidence value 0.08
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) CDKB1;1|CDKB1
Function assigned as per literature CDKB1 has a developmental role in rice
Subcellular localization as per literature Cytoplasm and nuclei
Cells used for localization experiment tobacco (N. benthamiana) leaves
NUCLEAR or Not Nuclear NUCLEAR
PMID 29701802
Reference of localization https://academic.oup.com/jxb/article/69/15/3587/4986277
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.129
NLS score -0.47
Protein Sequence >LOC_Os01g67160.1 protein
MEKYEKLEKVGEGTYGKVYKAQDRATGQLVALKKTRLEMDEEGIPPTALREISILRLLSQSLYVVRLLSVEQATKNGKPVLYLVFEFLDTDLKKFVDAYR
KGPNPRPLPTNVIKSFLYQLCKGVAHCHGHGVLHRDLKPQNLLVDKEKGILKIADLGLGRAFTVPMKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSVG
CIFAEMVRRQALFPGDSELQQLLHIFRLLGTPTEEQWPGVTDLRDWHEFPQWKPQILERQVPSLEPEGVDLLSKMLQYNPANRISAKAAMEHPYFDSLDK
SQF

GO Analysis
1
GO Category Biological Process
GO Term cellular component organization
2
GO Category Biological Process
GO Term anatomical structure morphogenesis
3
GO Category Biological Process
GO Term cell growth
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Biological Process
GO Term cellular process
6
GO Category Cellular comBiological Processonent
GO Term nucleus
7
GO Category Biological Process
GO Term reproduction
8
GO Category Biological Process
GO Term post-embryonic development
9
GO Category Biological Process
GO Term embryo development
10
GO Category Molecular Function
GO Term kinase activity
11
GO Category Biological Process
GO Term protein modification process
12
GO Category Biological Process
GO Term DNA metabolic process
13
GO Category Biological Process
GO Term biosynthetic process
14
GO Category Biological Process
GO Term cell cycle
15
GO Category Cellular comBiological Processonent
GO Term cytoplasm
16
GO Category Molecular Function
GO Term protein binding
Presence of Splice variants No