LOC_Os01g67134

Expression Profile

RGAP LOCUS ID LOC_Os01g67134
RAP-DB ID Os01g0896800
Function ribosomal L18p/L5e family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization mito
score 8.5

2) CELLO Prediction
localization Nuclear
score 1.7

3) NUCPRED Prediction
localization Non Nuclear
score 0.53

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.12
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) RPL5
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.176
NLS score -0.16
Protein Sequence >LOC_Os01g67134.1 protein
MGGFVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTG
LLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGH
VADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDDDEEEDD
E

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term ribosome
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Cellular comBiological Processonent
GO Term cytosol
4
GO Category Biological Process
GO Term anatomical structure morphogenesis
5
GO Category Biological Process
GO Term multicellular organismal development
6
GO Category Cellular comBiological Processonent
GO Term cytoplasm
7
GO Category Biological Process
GO Term cellular process
8
GO Category Biological Process
GO Term biological_process
9
GO Category Cellular comBiological Processonent
GO Term nucleolus
10
GO Category Molecular Function
GO Term structural molecule activity
11
GO Category Cellular comBiological Processonent
GO Term plasma membrane
12
GO Category Cellular comBiological Processonent
GO Term plastid
13
GO Category Cellular comBiological Processonent
GO Term nucleus
14
GO Category Molecular Function
GO Term RNA binding
15
GO Category Cellular comBiological Processonent
GO Term vacuole
16
GO Category Biological Process
GO Term transport
17
GO Category Biological Process
GO Term translation
Presence of Splice variants No