LOC_Os01g66100

Expression Profile

RGAP LOCUS ID LOC_Os01g66100
RAP-DB ID Os01g0883800
Function gibberellin 20 oxidase 2, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 3

2) CELLO Prediction
localization PlasmaMembrane
score 1.117

3) NUCPRED Prediction
localization Non Nuclear
score 0.23

4) Y-Loc Prediction
localization Cytoplasm
score 98
confidence value 0.88
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) sd1|GA20ox2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.103
NLS score -0.22
Protein Sequence >LOC_Os01g66100.1 protein
MVAEHPTPPQPHQPPPMDSTAGSGIAAPAAAAVCDLRMEPKIPEPFVWPNGDARPASAAELDMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSE
HGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGRVYQKYCEEMKELS
LTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRY
KSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHYPDFTWADLMRFTQRHYRADTRTLDAFTRWLAPPAADAAATAQVEAAS

GO Analysis
1
GO Category Biological Process
GO Term cellular component organization
2
GO Category Biological Process
GO Term anatomical structure morphogenesis
3
GO Category Biological Process
GO Term cell growth
4
GO Category Molecular Function
GO Term catalytic activity
5
GO Category Biological Process
GO Term response to endogenous stimulus
6
GO Category Biological Process
GO Term metabolic process
7
GO Category Cellular comBiological Processonent
GO Term cytoplasm
8
GO Category Biological Process
GO Term biosynthetic process
9
GO Category Biological Process
GO Term cellular process
10
GO Category Biological Process
GO Term lipid metabolic process
11
GO Category Biological Process
GO Term reproduction
12
GO Category Biological Process
GO Term response to abiotic stimulus
13
GO Category Biological Process
GO Term post-embryonic development
14
GO Category Biological Process
GO Term flower development
15
GO Category Biological Process
GO Term signal transduction
16
GO Category Biological Process
GO Term multicellular organismal development
Presence of Splice variants No