LOC_Os01g65900

Expression Profile

RGAP LOCUS ID LOC_Os01g65900
RAP-DB ID Os01g0881500
Function chitin-inducible gibberellin-responsive protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6.5

2) CELLO Prediction
localization Nuclear
score 2.127

3) NUCPRED Prediction
localization Non Nuclear
score 0.38

4) Y-Loc Prediction
localization Nuclear
score 94.59
confidence value 0.37
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category GRAS

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPH1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.092
NLS score -0.47
Protein Sequence >LOC_Os01g65900.1 protein
MSFIRRADPSTTYADNLYIHKFGTPNSNFAARRYASDTQLFRYGPEPYNPENSFYNQQASPMPYMVTADGHSPSSADNSCSDVAKDSPLVSNVSQQNSQS
ISDNQSSELEVEFDEDDIRMKLQELEHALLDDSDDILYEISQAGSINDEWADPMKNVILPNSPKESESSISCAGSNNGEPRTPKQLLFDCAMALSDYNVD
EAQAIITDLRQMVSIQGDPSQRIAAYLVEGLAARIVASGKGIYKALSCKEPPTLYQLSAMQILFEICPCFRFGFMAANYAILEACKGEDRVHIIDFDINQ
GSQYITLIQFLKNNANKPRHLRITGVDDPETVQRTVGGLKVIGQRLEKLAEDCGISFEFRAVGANIGDVTPAMLDCCPGEALVVNFAFQLHHLPDESVSI
MNERDQLLRMVKGLQPKLVTLVEQDANTNTAPFQTRFREVYDYYAALFDSLDATLPRESPDRMNVERQCLAREIVNILACEGPDRVERYEVAGKWRARMT
MAGFTPCPFSSNVISGIRSLLKSYCDRYKFEEDHGGLHFGWGEKTLIVSSAWQ

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
3
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
Presence of Splice variants No