| RGAP LOCUS ID |
LOC_Os01g64970 |
| RAP-DB ID |
Os01g0869900 |
| Function |
CAMK_CAMK_like.11 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
cysk |
| score |
12 |
2) CELLO
Prediction
|
| localization |
Nuclear |
| score |
3.365 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.31 |
4) Y-Loc
Prediction
|
| localization |
Cytoplasm |
| score |
66 |
| confidence value |
0.25 |
| Number Of Software Predicting Nucleus |
1 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
SAPK4|OSPDK |
| Function assigned as per literature |
SAPK4 functions as a regulatory factor in plant salt stress acclimation |
| Subcellular localization as per literature |
Cytoplasm and nucleus |
| Cells used for localization experiment |
Onion epidermis cells and Arabidopsis thaliana mesophyll protoplasts |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
18442365 |
| Reference of localization |
https://bmcplantbiol.biomedcentral.com/articles/10.1186/1471-2229-8-49 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.15 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os01g64970.1 protein
MEKYEAVRDIGSGNFGVARLMRNRETRELVAVKCIERGHRIDENVYREIINHRSLRHPNIIRFKEVILTPTHLMIVMEFAAGGELFDRICDRGRFSEDEA
RYFFQQLICGVSYCHHMQICHRDLKLENVLLDGSPAPRLKICDFGYSKSSVLHSRPKSAVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPF
EDQDDPKNIRKTIQRIMSVQYKIPDYVHISAECKQLIARIFVNNPLRRITMKEIKSHPWFLKNLPRELTETAQAMYYRRDNSVPSFSDQTSEEIMKIVQE
ARTMPKSSRTGYWSDAGSDEEEKEEEERPEENEEEEEDEYDKRVKEVHASGELRMSSLRI |
GO Analysis |
| 1 |
| GO Category |
Biological Process |
| GO Term |
metabolic process |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
cellular process |
|
| 3 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
nucleus |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
response to stress |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
response to abiotic stimulus |
|
| 6 |
| GO Category |
Molecular Function |
| GO Term |
kinase activity |
|
| 7 |
| GO Category |
Biological Process |
| GO Term |
protein modification process |
|
| 8 |
| GO Category |
Biological Process |
| GO Term |
response to endogenous stimulus |
|
| 9 |
| GO Category |
Molecular Function |
| GO Term |
protein binding |
|
| 10 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytosol |
|
| Presence of Splice variants |
No |
