LOC_Os01g62780

Expression Profile

RGAP LOCUS ID LOC_Os01g62780
RAP-DB ID Os01g0846450
Function expressed protein

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 6

2) CELLO Prediction
localization Nuclear
score 2.587

3) NUCPRED Prediction
localization Non Nuclear
score 0.54

4) Y-Loc Prediction
localization Nuclear
score 59.14
confidence value 0.11
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsHESO1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.103
NLS score 0.27
Protein Sequence >LOC_Os01g62780.1 protein
MATVDSYGAVFKPFGSFVSNLYSNSGDLDISVHLPNNSIISKKKKQYVLRELMRVLQNRGVAGYVQFVPFARVPVLQYVSNTFGISCDISVNNYPGRIKS
KIFCWISSLDVRFGDMVLLIKEWAKAQNINDPKTGTLNSYSLCLLVLFHFQTCEPAILPPLKEIYEGNIEEGIAAYLYLNSLHLHTEMTVYDEEHLDEVK
DPIERPDNAARAVDLKGLERIAGAFTAANRKFASLQHAKRNDLLEMLCTPAVGSKLGIRVSQEVMANSCTNTPRRNRHHGRPTEQVSARPSDNQNHRGAR
EFTVGRQVHNPPRARQSTGAYHALNSQHVIPALSQPAGIYQTVGPYQSNGHPQVYTRDVQTVGHQNYRHPMGHNTQLQTVEPYQSNNSQPQVHATSIQAP
RQYQNYTR

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No