LOC_Os01g62430

Expression Profile

RGAP LOCUS ID LOC_Os01g62430
RAP-DB ID Os01g0841700
Function C2 domain containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 14

2) CELLO Prediction
localization Nuclear
score 1.352

3) NUCPRED Prediction
localization Non Nuclear
score 0.15

4) Y-Loc Prediction
localization Chloroplast
score 5
confidence value 0.2
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Rpp17|OsERG1
Function assigned as per literature OsERG1 is involved in plant defense signaling systems
Subcellular localization as per literature Cytosol but translocates to the plasma membrane of plant cells in response to both fungal elicitor and Ca2+ signals
Cells used for localization experiment Arabidopsis protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 14529272
Reference of localization https://pubs.acs.org/doi/abs/10.1021/bi034576n
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.122
NLS score 0.1
Protein Sequence >LOC_Os01g62430.1 protein
MAGSGVLEVHLVDAKGLTGNDFLGEIGASYLDPRPSAVRRRRGRSSSISSAFLSCAGKIDPYVVVQYRSQERKSSVARDQGKNPSWNEVFKFQINSTAAT
GQHKLFLRLMDHDTFSRDDFLGEATINVTDLISLGMEHGTWEMSESKHRVVLADKTYHGEIRVSLTFTASAKAQDHAEQVGGWAHSFRQ

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES