LOC_Os01g62200

Expression Profile

RGAP LOCUS ID LOC_Os01g62200
RAP-DB ID Os01g0839200
Function domain of unknown function DUF966 domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 14

2) CELLO Prediction
localization Nuclear
score 3.82

3) NUCPRED Prediction
localization Non Nuclear
score 0.53

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.55
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsDSR2
Function assigned as per literature OsDSR2 might participate in the negative regulation of ABA-dependent salt and simulated drought stress tolerances in rice
Subcellular localization as per literature Plasma membrane and nucleus
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 24247850
Reference of localization https://link.springer.com/article/10.1007%2Fs00299-013-1532-0
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.139
NLS score 0.64
Protein Sequence >LOC_Os01g62200.1 protein
MAVVVAGSRGKGEQQRLPWREAQQEARCPDMAPSRPPRPRPGPARAAVVYYLSRNGHLEHPHFMEVAVASPDGLYLRDVIDRLDALRGKGMARMYSWASK
RSYRNGFVWHDLADDDYIYPVAGREYVLKGTERLHPIQLPLLDAAAASSCSSGSQETATSSPPGWENGTGEARQKKGAGINTSELCEYRVYKAEDPAAAA
ADAATQTEDGYRSSRGRHAQRAAAAAAQEELSREETSPPTASTSPETLEALIKADGRVMAAVTGGGRTRASSVLMQLISCGSVSVKSTLASPVMARTAAH
YRPRPPRPPTLASTTTEIPNYRQKIVEDKEYFSGSLVETKRSSPADTSQDIAVLRRSSSYNADRVQKVEPSTEAVDMHDRCIPRRPRGKKDGGAYLISGG
NGQYGSKRHGG

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES