LOC_Os01g62020

Expression Profile

RGAP LOCUS ID LOC_Os01g62020
RAP-DB ID Os01g0837300
Function NAD dependent epimerase/dehydratase family domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 7

2) CELLO Prediction
localization Mitochondrial
score 3.1

3) NUCPRED Prediction
localization Non Nuclear
score 0.3

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.33
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) UXS-4
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.133
NLS score -0.47
Protein Sequence >LOC_Os01g62020.1 protein
MSSSPSCSRWTGSITSRAPRPLCTTSTTPSRRSYPSRPGSAHTFDLAKRIGARFLLTSTSEVYGDPLEHPQKETYWGHVNPIGVRSCYDEGKRTAETLTM
DYHRGGGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRRQPMTVYGDGKQTRSFQYVSDLVAGLMALMEGDHIGPFNLGNPGEFTMLELAQVVKETID
PMATIEFKPNTADDPHMRKPDITKAKHLLRWEPKVSLREGLPLMVKDFRQRILDE

GO Analysis
1
GO Category Molecular Function
GO Term catalytic activity
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
4
GO Category Cellular comBiological Processonent
GO Term Golgi apparatus
5
GO Category Biological Process
GO Term carbohydrate metabolic process
6
GO Category Biological Process
GO Term cellular process
Presence of Splice variants YES