LOC_Os01g61160

Expression Profile

RGAP LOCUS ID LOC_Os01g61160
RAP-DB ID Os01g0827300
Function laccase precursor protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 4.5

2) CELLO Prediction
localization Extracellular
score 1.84

3) NUCPRED Prediction
localization Non Nuclear
score 0.03

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.3
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsChI1
Function assigned as per literature OsChI1 may play roles in response to drought and salinity stresses in rice
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 25218040
Reference of localization https://www.sciencedirect.com/science/article/pii/S0378111914010440
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.069
NLS score -0.47
Protein Sequence >LOC_Os01g61160.1 protein
MASSSSSRLLFLLSCSVLALLAGAEVHHHEFIVQETPVKRLCKTHNVITVNGQLPGPTLEVREGDTVVINVVNHAQYNVTIHWHGIRQFRTGWADGPEFV
TQCPIKPGGSYKYRFTIEGQEGTLWWHAHSSWLRATVYGALIIRPRENKTYPFEKPAREVPLILGEWWDADPIQVIREAQRTGAAPNISDAYTINGQPGD
LYNCSKEETTAVPVKPGETALLRFINAALNQELFVSIAQHKMTVVGVDASYTKPFTTSVLMIAPGQTTDVLVTMDQAPTRYYLAARAYDSAQGVAFDNTT
TTAVIEYDCGCATDFGPSIPPAFPVLPAFNDTNTATAFAAGIRSPHEVKIPGPVDENLFFTVGVGLFNCEPGQQCGGPNNTRFTASMNNISFVFPQTTSL
LHAHYYGIPGVFTTDFPAYPPVQFDYTAQNVPRYLWQPVPATKLYKLKFGSVVQIVLQDTSIVSPENHPIHIHGYDFYILAEGFGNFDPKKDAKKFNYVD
PPQRNTVAVPTNGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVEDGYGKLETLEAPPVDLPMC

GO Analysis
1
GO Category Biological Process
GO Term catabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term secondary metabolic process
4
GO Category Cellular comBiological Processonent
GO Term cell
5
GO Category Cellular comBiological Processonent
GO Term extracellular region
6
GO Category Biological Process
GO Term metabolic process
Presence of Splice variants No