LOC_Os01g61080

Expression Profile

RGAP LOCUS ID LOC_Os01g61080
RAP-DB ID Os01g0826400
Function WRKY24, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 11

2) CELLO Prediction
localization Nuclear
score 4.482

3) NUCPRED Prediction
localization Non Nuclear
score 0.77

4) Y-Loc Prediction
localization Nuclear
score 99.7
confidence value 0.56
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category WRKY

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsWRKY24
Function assigned as per literature repress abscisic acid and gibberellin signaling in aleurone cells
Subcellular localization as per literature Nucleus
Cells used for localization experiment barley aleurone cell
NUCLEAR or Not Nuclear NUCLEAR
PMID 19199048
Reference of localization https://link.springer.com/article/10.1007%2Fs11103-009-9463-4
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.094
NLS score 0.22
Protein Sequence >LOC_Os01g61080.1 protein
MTTSSSGSVETSANSRLGTFSFASASFTDLLGGNAGAGGGGVSRYKAMTPPSLPLSPPPVSPSSFFNSPIGMNQADFLGSPVLLTSSIFPSPTTGAFASQ
HFDWRPEVAAAQSADQGGKDEQRNSYSDFSFQTAPASEEAVRTTTFQPPVPPAPLGDEAYRSQQQQQPWGYQQQPAGMDAGANAASFGAAPFQATSSEMA
PQVQGGGGYSQPQSQRRSSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGTHNHAKPQNTRRNSGSSAAQVLQSGGDMS
EHSFGGMSGTAATPENSSASFGDDEIRVGSPRAGNGGGDEFDDDEPDSKRWRKDGDGEGISMAGNRTVREPRVVVQTMSDIDILDDGYRWRKYGQKVVKG
NPNPRSYYKCTTAGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSAALYRPAPPAAAATSSHPYLPNQPPPMSYQPTGPQPYALRPDGFGGQGPFG
GVVGGSSFGGFSGFDDARGSYMSQHQQQQRQNDAMHASRAKEEPGDDMFFQNSLY

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Biological Process
GO Term response to abiotic stimulus
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
5
GO Category Biological Process
GO Term response to biotic stimulus
6
GO Category Biological Process
GO Term cellular process
7
GO Category Biological Process
GO Term biological_process
8
GO Category Molecular Function
GO Term protein binding
9
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
10
GO Category Biological Process
GO Term secondary metabolic process
11
GO Category Cellular comBiological Processonent
GO Term nucleus
12
GO Category Biological Process
GO Term catabolic process
Presence of Splice variants No