LOC_Os01g60490

Expression Profile

RGAP LOCUS ID LOC_Os01g60490
RAP-DB ID Os01g0820400
Function WRKY22, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 10

2) CELLO Prediction
localization Nuclear
score 3.903

3) NUCPRED Prediction
localization Non Nuclear
score 0.52

4) Y-Loc Prediction
localization Nuclear
score 99.69
confidence value 0.8
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category WRKY

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsWRKY22
Function assigned as per literature WRKY22 promotes aluminum tolerance via activation of OsFRDL4 expression and enhancement of citrate secretion in rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment Nicotiana benthamiana leaves
NUCLEAR or Not Nuclear NUCLEAR
PMID 29658118
Reference of localization https://nph.onlinelibrary.wiley.com/doi/epdf/10.1111/nph.15143
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.113
NLS score -0.47
Protein Sequence >LOC_Os01g60490.1 protein
MVKRSDNMDSSSECSRGAHKRLLQDSRSYDQENAMKKVCIGTRTEYTYAPYHDGYQWRKYGQKMIRGNSFPRCYYRCTYHQDHGCPASKHVEQHNSEDPP
LFRVIYTNEHTCGTSNSASDYMASSMQIQQIADASLRKAQAAERLRKAEVETPRLMHSPPPRCSGGYNMAMKEEKDVIVSSLLTVIRGCHIAESAGNNSA
AALPVNRPPPAVARSDHYSCSYAISPELLPASDDLTLDFMLDSVLDPHWVEPLDLAWLKESTHTG

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
3
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
Presence of Splice variants No