LOC_Os01g59500

Expression Profile

RGAP LOCUS ID LOC_Os01g59500
RAP-DB ID Os01g0810000
Function U3 small nucleolar RNA-associated protein 11, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 10.5

2) CELLO Prediction
localization Nuclear
score 3.258

3) NUCPRED Prediction
localization Nuclear
score 0.94

4) Y-Loc Prediction
localization Nuclear
score 99.95
confidence value 0.94
Number Of Software Predicting Nucleus 4
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) U3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 3
Number of Bipartite 3
Basic residues % 0.262
NLS score 3.39
Protein Sequence >LOC_Os01g59500.1 protein
MSSLRNAIQRRAHKERAQPESRKKFGLLEKHKDYIVRAKAFHQKEETIRKLKEKASFRNPDEFYFKMINSKTVDGIHRPKPEANKYTEDELMLLKTKDMG
YILQGIQSEKKKIEKLSSMLHELDNKRPNKHVYFAEDREEVKEIQSRIEQKSSSLGLDNIPSRIKRKTASSYRELEERKQRVQKLEKLYADMALQKELKK
PGRKRKLREDEIENQTSRPVYKWRAQRKR

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term intracellular
3
GO Category Biological Process
GO Term multicellular organismal development
Presence of Splice variants YES