LOC_Os01g57480

Expression Profile

RGAP LOCUS ID LOC_Os01g57480
RAP-DB ID Os01g0783800
Function serine/threonine-protein kinase receptor precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization PlasmaMembrane
score 3.788

3) NUCPRED Prediction
localization Non Nuclear
score 0.48

4) Y-Loc Prediction
localization Chloroplast
score 4
confidence value 0.12
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) SDS2
Function assigned as per literature SDS2 forms complex with SPL11, and OsRLCK118/176 controls PCD and immunity in rice.
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 29576481
Reference of localization https://www.cell.com/cell-host-microbe/fulltext/S1931-3128(18)30100-8?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS1931312818301008%3Fshowall%3Dtrue
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.094
NLS score -0.13
Protein Sequence >LOC_Os01g57480.1 protein
MMWKRSSCREVITLLIMSLWLERCLGTDSISANETLPDGQTIVSMKNVFVLGFFSPGASSHRYVGIWYSNPVNRTIVWVANRNEPLLDASGVLMFDVNGN
LVIAHGGRSLIVAYGQGTKDMKATILDSGNLALSSMANPSRYIWQSFDSPTDTWLPEMKIGLRTTNQTLISWSSIDDPAMGDYKLGMDPAGLSHPAGLSQ
FIVWWRGNNFWTSGHWSGDMFSLIPELKFFTTIPIFFKCNNSTNDITCTYSANPSDRMTKIVLNSTGSLSIMQFDSLEKSWILLWRQPSTCEVHNLCGAF
GICNDNDAVPKCYCTKGFVPQDIIAYTNGYTREGCNRQTKLQCSSDEFFEIPNVRLPDNRKKLPVMGLSECKLACLMNCSCTAYAYLQLDGCSLWYGDLM
NLQDGYDVHGAGTLCLRLAASEVESGRNSGSGHKMLWMACVIPPVVVLSFCSLSFVLWRRRSQNKGKENLHAHHSLMTLDTDSAVKLWESEEAGSQFVLF
SFSQIANSTNNFSAQNKLGEGGFGPVYKGNLPDRQDIAVKRLATNSGQGLVEFKNEVLLIAKLQHVNLVRLLGCCIQGEEKILIYEYMPNKSLDFFLFEK
SRSVVLDWRKRIHIIEGIAHGLLYLHKHSRLRIIHRDLKASNILLDIDMNPKISDFGLARIFGSKETQANTNRVVGTYGYMAPEYAMQGIFSVKSDVFSF
GVLLLEIVSGMRNAGSHRRGRSLNLLGHAWELWREGRWFDLVDPSTRDAYPEHRVLRCVHVGLMCVQENAVDRPTMSDVISMLTSESITLPDPRQPAFLS
IVLPAEMDAHDGSFSQNAMTITDLEGR

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Molecular Function
GO Term kinase activity
3
GO Category Molecular Function
GO Term nucleotide binding
4
GO Category Molecular Function
GO Term carbohydrate binding
5
GO Category Biological Process
GO Term pollen-pistil interaction
6
GO Category Biological Process
GO Term protein modification process
Presence of Splice variants No