LOC_Os01g57310

Expression Profile

RGAP LOCUS ID LOC_Os01g57310
RAP-DB ID Os01g0781700
Function rp1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 3

2) CELLO Prediction
localization Nuclear
score 2.7

3) NUCPRED Prediction
localization Non Nuclear
score 0.57

4) Y-Loc Prediction
localization Cytoplasm
score 81
confidence value 0.15
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Pi37
Function assigned as per literature Pi37 encodes a Nucleotide binding site-Leucine rich repeat protein and is a member of the resistance gene cluster on Rice chromosome 1
Subcellular localization as per literature cytoplasm
Cells used for localization experiment onion epidermal cells
NUCLEAR or Not Nuclear Not Nuclear
PMID 17947408
Reference of localization http://www.genetics.org/content/177/3/1871
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.115
NLS score -0.47
Protein Sequence >LOC_Os01g57310.2 protein
MAEVVLAGLRLAATPICVKLLCNASTCLGVDMTRELHELETIIIPQFELVIEAAEKGNHRAKLDRWLRELKQAFYNAEDLLDEHEYNILKCKAKHKDSLV
KDSTQVHDSSISNILKQPMRAVSSRMSNLRPENRKILCQLNELKTMLEKAKEFRELIHLPAGNSLEGPSVPTIVVPVVTSLLPPRVFGRNMDRDRIIHLL
TKPMATVSSSVGYSGLAIVAHGGAGKSTLAQCVYNDKRVQEHFDVRIWVCISRKLDVHRHTREIIESATNGECPRVDNLDTLQCRLKDIMQKSEKFLLVL
DDVWFDESVNEREWDQLLDPLVSQQEGSRVLVTSRRDVLPAALHCKDVVHLENMEDAEFLALFKYHAFSGTEIRNPQLHARLEEVAEKIAKRLGQSPLAA
RTVGSQLSRNKDIAIWKSALNIENLSEPMKALLWSYNKLDSRLQRCFLYCSLFPKGHKYKIDEMVDLWVAEGLVDSRNQGDKRIEDIGRDYFNEMVSGSF
FQPVSERYMGTWYIMHDLLHDLAESLTKEDCFRLEDDGVKEIPATVRHLSICVDSMKFHKQKICKLRYLRTVICIDPLMDDGDDIFNQLLKNLKKLRVLH
LSFYNSSSLPECIGELKHLRYLSIISTLISELPRSLCTLFHLELLHLNDKVKNLPDRLCNLRKLRRLEAYDDRNRMYKLYRAALPQIPYIGKLSLLQDID
GFCVQKQKGYELRQLRDMNKLGGNLRVVNLENVTGKDEASESKLHQKTHLRGLHLSWNDVDDMDVSHLEILEGLRPPSQLEDLTIEGYKSTMYPSWLLDG
SYFENLESFTLANCCVIGSLPPNTEIFRHCMTLTLENVPNMKTLPFLPEGLTSLSIEGCPLLVFTTNNDELEHHDYRESITRANNLETQLVLIWEANSDS
DIRSTLSSEHSSMKKLTELMDTDMSGNLQTIESALEIERDEALVKEDIIKVWLCCHEERMRFIYSRKAGLPLVLPSGLCVLSLSSCSITDGALAICLGGL
TSLRNLFLTEIMTLTTLPPEEVFQHLGNLRYLVIRSCWCLRSFGGLRSATSLSEIRLFSCPSLQLARGAEFMQMSLEKLCVYNCVLSADFFCGDWPHLDD
ILLSGCRSSSSLHVGDLTSLESFSLYHFPDLCTLEGLSSLQLHHVHLIDVPKLTTESISQFRVQRSLYISSSVMLNHMLSAEGFVVPEFLSLESCKEPSV
SFEESANFTSVKCLRLCNCEMRSPPGNMKCLSSLTKLDIYDCPNISSIPDLPSSLQHICIWGCELLKESCRAPEGESWPKIAHIRWKEFR

GO Analysis
1
GO Category Molecular Function
GO Term protein binding
2
GO Category Biological Process
GO Term response to stress
Presence of Splice variants YES