| RGAP LOCUS ID |
LOC_Os01g57240 |
| RAP-DB ID |
Os01g0780800 |
| Function |
expressed protein |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
chlo |
| score |
4 |
2) CELLO
Prediction
|
| localization |
Extracellular |
| score |
4.091 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.13 |
4) Y-Loc
Prediction
|
| localization |
Nuclear |
| score |
88.71 |
| confidence value |
0.83 |
| Number Of Software Predicting Nucleus |
1 |
| Seed Specific |
No |
| Transcription factor category |
ULT |
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsULT1 |
| Function assigned as per literature |
OsULT1 may functions in abscisic acid pathways |
| Subcellular localization as per literature |
Nucleus when interacted with OsTCP19 |
| Cells used for localization experiment |
Onion epidermal cells |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
25925167 |
| Reference of localization |
https://www.nature.com/articles/srep09998 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.157 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os01g57240.1 protein
MAAAANGGGAALFSEEELRDVSGVRRCEDFVEVTCGCTSHRYGDAVGRLRVYASGDLEVSCECTPGCREDKLTPSAFEKHSGRETAGKWRNTVWVMVQGE
KVPLSKTALLKYYSLSHKSANGSNKGRNGRLSHRDEFIHCTECGKERRFRLRSKEECRIYHDALAKPNWTCADLTTDRVTCGDEEERASRKVLRGCSRST
SCTGCVKCVCFGCEICRFTDCGCQTCVDFYHNSKE |
GO Analysis |
| 1 |
| GO Category |
Molecular Function |
| GO Term |
DNA binding |
|
| 2 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
nucleus |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
reproduction |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
post-embryonic development |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
growth |
|
| 6 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytosol |
|
| 7 |
| GO Category |
Biological Process |
| GO Term |
multicellular organismal development |
|
| 8 |
| GO Category |
Biological Process |
| GO Term |
flower development |
|
| Presence of Splice variants |
No |
