LOC_Os01g55280

Expression Profile

RGAP LOCUS ID LOC_Os01g55280
RAP-DB ID Os01g0757600
Function expressed protein

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 8

2) CELLO Prediction
localization Nuclear
score 1.918

3) NUCPRED Prediction
localization Non Nuclear
score 0.48

4) Y-Loc Prediction
localization Nuclear
score 63.16
confidence value 0.18
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMY1
Function assigned as per literature OsMY1 is an important target of OsRac5 and two genes are involved in ric egrowth and development
Subcellular localization as per literature OsMY1 was colocalized with OsRac5 in cytoplasm
Cells used for localization experiment onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 24464125
Reference of localization https://link.springer.com/content/pdf/10.1007%2Fs11033-014-3032-x.pdf
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.158
NLS score -0.22
Protein Sequence >LOC_Os01g55280.1 protein
MPRSRGSELPQRASPRAPLHLKTTACSDANGAHHRTVVDRSSPKLADRHSPRSPLHEKKRAGTRVAELETKLGKVQDELKKLREQLATAEAAKKDAQVAL
EEAKKRVGTKGSPASAAAASPRSPSPVAVETPKKTEQQLKVTEPPAEEESSINSPATDVFEVVRTESGDKENQSAAGAEDGEEVSCGIKAALAEKELEEE
ETKKMIEEESIDATAIDSGEKENPEVAELKAKLMAKDMEVAILTADNAELKKQVGEAAEAAKKAEEEAAAAASPREAQI

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No